HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:14.3 nTPM
HPA:14.3 nTPM
GTEx:12.4 nTPM
FANTOM5:49.7 Scaled Tags Per Million
Pig:24.7 nTPM
Mouse:61.9 nTPM
Allen mouse:6.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.3
Sample id Sample description nTPM
Hippocampus
nTPM: 13.2
1911 Female, age 85, right hemisphere 14.7
1898 Male, age 80, left hemisphere 14.3
1855 Male, age 76, left hemisphere 13.8
2529 Female, age 94, left hemisphere 12.7
2148 Female, age 91, left hemisphere 12.0
2621 Female, age 67, right hemisphere 11.5
Dentate gyrus
nTPM: 12.9
2010 Male, age 76, both hemispheres 14.0
1927 Female, age 91, both hemispheres 13.8
2246 Female, age 85, both hemispheres 13.3
2528 Male, age 74, both hemispheres 13.2
2530 Female, age 94, left hemisphere 11.7
2531 Female, age 67, both hemispheres 11.2
Entorhinal gyrus
nTPM: 12.4
1938 Female, age 85, left hemisphere 14.0
2117 Female, age 91, right hemisphere 13.8
1787 Male, age 76, left hemisphere 13.2
2764 Male, age 80, right hemisphere 11.5
2613 Female, age 94, left hemisphere 11.4
2686 Male, age 75, right hemisphere 10.3
Hippocampus, CA1
nTPM: 14.3
2749 Male, age 80, left hemisphere 18.6
1873 Female, age 85, both hemispheres 14.1
2045 Male, age 76, both hemispheres 13.5
2527 Male, age 74, both hemispheres 13.1
2082 Female, age 91, right hemisphere 12.3
Hippocampus, CA2
nTPM: 13.2
2249 Male, age 74, both hemispheres 14.6
1940 Female, age 85, left hemisphere 14.4
1963 Male, age 80, left hemisphere 13.6
2113 Female, age 91, right hemisphere 13.2
1892 Male, age 76, both hemispheres 12.5
2437 Female, age 94, left hemisphere 11.1
Hippocampus, CA3
nTPM: 13.8
2137 Male, age 80, left hemisphere 17.2
2436 Male, age 74, both hemispheres 15.0
1891 Female, age 85, both hemispheres 14.7
1867 Male, age 76, both hemispheres 14.0
2620 Female, age 94, left hemisphere 11.1
2861 Female, age 67, both hemispheres 10.7
Parahippocampal cortex
nTPM: 12.7
1850 Male, age 80, both hemispheres 14.7
1933 Female, age 85, both hemispheres 14.0
2018 Male, age 76, both hemispheres 13.4
2250 Female, age 67, right hemisphere 13.4
1990 Female, age 91, right hemisphere 13.0
2693 Female, age 94, both hemispheres 12.5
2532 Female, age 72, left hemisphere 12.1
2245 Female, age 91, both hemispheres 12.0
2692 Male, age 74, both hemispheres 11.4
2622 Female, age 67, right hemisphere 9.9
Perirhinal gyrus
nTPM: 14.2
1841 Female, age 85, right hemisphere 15.0
1794 Male, age 80, right hemisphere 14.7
1847 Female, age 91, left hemisphere 14.5
2521 Female, age 94, right hemisphere 14.1
2848 Male, age 76, right hemisphere 12.8
Subiculum
nTPM: 12.9
1901 Male, age 80, both hemispheres 15.0
2042 Male, age 76, both hemispheres 13.8
1977 Female, age 85, both hemispheres 13.4
2729 Female, age 91, right hemisphere 12.7
2619 Male, age 74, both hemispheres 11.5
2438 Female, age 94, left hemisphere 11.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.4
Samples: 197

Max nTPM: 21.6
Min nTPM: 7.5
Std nTPM: 2.1
Median nTPM: 12.4
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 21.6
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 20.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 17.4
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 17.2
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 17.2
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 16.4
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 16.1
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 16.0
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 16.0
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 15.6
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 15.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 49.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 49.7
FF:10169-103B7 60 years, female 52.3
FF:10153-102I9 76 years, female 47.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 24.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 22.6
Samples: 4

Max nTPM: 24.8
Min nTPM: 19.3
Sample A Female 24.7
Sample B Female 21.6
Sample C Male 24.8
Sample D Male 19.3
Entorhinal cortex
nTPM: 24.7
Samples: 4

Max nTPM: 27.2
Min nTPM: 22.3
Sample A Female 24.4
Sample B Female 27.2
Sample C Male 24.8
Sample D Male 22.3
Subiculum
nTPM: 23.0
Samples: 4

Max nTPM: 26.4
Min nTPM: 21.8
Sample A Female 26.4
Sample B Female 22.0
Sample C Male 21.9
Sample D Male 21.8
Ventral hippocampus
nTPM: 20.0
Samples: 4

Max nTPM: 21.0
Min nTPM: 19.4
Sample A Female 21.0
Sample B Female 19.8
Sample C Male 19.4
Sample D Male 19.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 61.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 60.7
Samples: 4

Max nTPM: 65.3
Min nTPM: 57.2
Sample A Male 58.6
Sample B Male 61.6
Sample C Female 57.2
Sample D Female 65.3
Hippocampal formation
nTPM: 61.9
Samples: 4

Max nTPM: 68.7
Min nTPM: 56.4
Sample A Male 58.1
Sample B Male 64.3
Sample C Female 68.7
Sample D Female 56.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.0
69443433 Antisense, RP_050414_04_A12, Mouse strain C57BL/6J (56 days, male) 6.0

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