HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:13.6 nTPM
HPA:13.6 nTPM
GTEx:9.8 nTPM
FANTOM5:11.7 Scaled Tags Per Million
Pig:8.6 nTPM
Mouse:8.6 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.6
Sample id Sample description nTPM
Hippocampus
nTPM: 12.0
1898 Male, age 80, left hemisphere 15.3
2621 Female, age 67, right hemisphere 13.0
2148 Female, age 91, left hemisphere 12.4
2529 Female, age 94, left hemisphere 11.8
1855 Male, age 76, left hemisphere 9.7
1911 Female, age 85, right hemisphere 9.7
Dentate gyrus
nTPM: 12.6
1927 Female, age 91, both hemispheres 15.5
2530 Female, age 94, left hemisphere 13.9
2531 Female, age 67, both hemispheres 13.4
2528 Male, age 74, both hemispheres 12.5
2010 Male, age 76, both hemispheres 10.7
2246 Female, age 85, both hemispheres 9.5
Entorhinal gyrus
nTPM: 13.6
2613 Female, age 94, left hemisphere 16.6
2764 Male, age 80, right hemisphere 15.2
2686 Male, age 75, right hemisphere 14.0
1787 Male, age 76, left hemisphere 12.4
1938 Female, age 85, left hemisphere 12.1
2117 Female, age 91, right hemisphere 11.2
Hippocampus, CA1
nTPM: 13.3
2749 Male, age 80, left hemisphere 24.1
2527 Male, age 74, both hemispheres 11.9
2082 Female, age 91, right hemisphere 10.4
1873 Female, age 85, both hemispheres 10.3
2045 Male, age 76, both hemispheres 9.5
Hippocampus, CA2
nTPM: 13.0
1963 Male, age 80, left hemisphere 19.7
2437 Female, age 94, left hemisphere 14.2
1892 Male, age 76, both hemispheres 12.0
2113 Female, age 91, right hemisphere 11.5
2249 Male, age 74, both hemispheres 11.1
1940 Female, age 85, left hemisphere 9.5
Hippocampus, CA3
nTPM: 12.7
2137 Male, age 80, left hemisphere 17.5
2620 Female, age 94, left hemisphere 14.1
2861 Female, age 67, both hemispheres 14.0
1867 Male, age 76, both hemispheres 10.3
2436 Male, age 74, both hemispheres 10.2
1891 Female, age 85, both hemispheres 9.9
Parahippocampal cortex
nTPM: 11.5
1990 Female, age 91, right hemisphere 14.0
2245 Female, age 91, both hemispheres 12.5
2250 Female, age 67, right hemisphere 12.3
2622 Female, age 67, right hemisphere 12.0
1933 Female, age 85, both hemispheres 11.8
1850 Male, age 80, both hemispheres 11.3
2693 Female, age 94, both hemispheres 10.8
2018 Male, age 76, both hemispheres 10.5
2692 Male, age 74, both hemispheres 10.2
2532 Female, age 72, left hemisphere 9.3
Perirhinal gyrus
nTPM: 12.9
1794 Male, age 80, right hemisphere 15.3
1847 Female, age 91, left hemisphere 14.4
2521 Female, age 94, right hemisphere 13.8
1841 Female, age 85, right hemisphere 11.1
2848 Male, age 76, right hemisphere 9.7
Subiculum
nTPM: 10.6
1977 Female, age 85, both hemispheres 13.0
1901 Male, age 80, both hemispheres 11.9
2619 Male, age 74, both hemispheres 11.5
2729 Female, age 91, right hemisphere 11.4
2042 Male, age 76, both hemispheres 7.8
2438 Female, age 94, left hemisphere 7.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 9.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.8
Samples: 197

Max nTPM: 44.7
Min nTPM: 0.4
Std nTPM: 7.7
Median nTPM: 8.4
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 44.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 38.7
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 37.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 29.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 28.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 28.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 27.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 27.2
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 26.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 26.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 25.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 11.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 11.7
FF:10169-103B7 60 years, female 12.5
FF:10153-102I9 76 years, female 10.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 8.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 8.3
Samples: 4

Max nTPM: 10.4
Min nTPM: 6.8
Sample A Female 10.4
Sample B Female 8.4
Sample C Male 6.8
Sample D Male 7.6
Entorhinal cortex
nTPM: 7.5
Samples: 4

Max nTPM: 8.6
Min nTPM: 6.5
Sample A Female 6.7
Sample B Female 8.2
Sample C Male 8.6
Sample D Male 6.5
Subiculum
nTPM: 6.6
Samples: 4

Max nTPM: 9.4
Min nTPM: 5.2
Sample A Female 9.4
Sample B Female 5.9
Sample C Male 5.9
Sample D Male 5.2
Ventral hippocampus
nTPM: 8.6
Samples: 4

Max nTPM: 11.3
Min nTPM: 6.8
Sample A Female 8.1
Sample B Female 6.8
Sample C Male 11.3
Sample D Male 8.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 8.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.9
Samples: 4

Max nTPM: 7.1
Min nTPM: 4.1
Sample A Male 6.1
Sample B Male 7.1
Sample C Female 6.3
Sample D Female 4.1
Hippocampal formation
nTPM: 8.6
Samples: 4

Max nTPM: 10.0
Min nTPM: 6.9
Sample A Male 8.6
Sample B Male 8.9
Sample C Female 6.9
Sample D Female 10.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
71587643 Antisense, RP_050915_04_F09, Mouse strain C57BL/6J (56 days, male) 0.2

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