HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:32.8 nTPM
HPA:32.8 nTPM
GTEx:24.9 nTPM
FANTOM5:7.6 Scaled Tags Per Million
Pig:27.2 nTPM
Mouse:9.4 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA037922Antibody HPA037923
Glial cells Not detectedNot detected
Neuronal cells MediumLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.8
Sample id Sample description nTPM
Hippocampus
nTPM: 25.1
2621 Female, age 67, right hemisphere 28.7
2529 Female, age 94, left hemisphere 25.9
1855 Male, age 76, left hemisphere 25.2
1911 Female, age 85, right hemisphere 23.9
1898 Male, age 80, left hemisphere 23.8
2148 Female, age 91, left hemisphere 23.0
Dentate gyrus
nTPM: 28.8
2530 Female, age 94, left hemisphere 51.2
2531 Female, age 67, both hemispheres 32.3
2010 Male, age 76, both hemispheres 29.1
2246 Female, age 85, both hemispheres 23.7
2528 Male, age 74, both hemispheres 19.4
1927 Female, age 91, both hemispheres 17.3
Entorhinal gyrus
nTPM: 32.8
2686 Male, age 75, right hemisphere 47.5
2764 Male, age 80, right hemisphere 34.3
2613 Female, age 94, left hemisphere 33.2
1787 Male, age 76, left hemisphere 30.2
2117 Female, age 91, right hemisphere 28.0
1938 Female, age 85, left hemisphere 23.5
Hippocampus, CA1
nTPM: 23.4
2749 Male, age 80, left hemisphere 28.4
2082 Female, age 91, right hemisphere 23.6
2045 Male, age 76, both hemispheres 22.2
2527 Male, age 74, both hemispheres 21.6
1873 Female, age 85, both hemispheres 21.4
Hippocampus, CA2
nTPM: 23.5
1963 Male, age 80, left hemisphere 30.0
2437 Female, age 94, left hemisphere 27.8
2249 Male, age 74, both hemispheres 21.4
1892 Male, age 76, both hemispheres 21.3
1940 Female, age 85, left hemisphere 21.0
2113 Female, age 91, right hemisphere 19.4
Hippocampus, CA3
nTPM: 20.6
2861 Female, age 67, both hemispheres 26.1
2137 Male, age 80, left hemisphere 22.6
1891 Female, age 85, both hemispheres 22.4
2620 Female, age 94, left hemisphere 21.5
1867 Male, age 76, both hemispheres 20.8
2436 Male, age 74, both hemispheres 9.9
Parahippocampal cortex
nTPM: 24.7
2532 Female, age 72, left hemisphere 33.1
2622 Female, age 67, right hemisphere 31.1
2692 Male, age 74, both hemispheres 30.7
2018 Male, age 76, both hemispheres 26.4
2245 Female, age 91, both hemispheres 25.5
1933 Female, age 85, both hemispheres 22.7
1990 Female, age 91, right hemisphere 22.7
1850 Male, age 80, both hemispheres 22.5
2693 Female, age 94, both hemispheres 16.8
2250 Female, age 67, right hemisphere 14.9
Perirhinal gyrus
nTPM: 20.5
2848 Male, age 76, right hemisphere 24.9
1794 Male, age 80, right hemisphere 23.5
1847 Female, age 91, left hemisphere 21.2
1841 Female, age 85, right hemisphere 18.2
2521 Female, age 94, right hemisphere 14.9
Subiculum
nTPM: 27.9
2438 Female, age 94, left hemisphere 34.8
2042 Male, age 76, both hemispheres 30.7
1901 Male, age 80, both hemispheres 30.5
1977 Female, age 85, both hemispheres 28.6
2619 Male, age 74, both hemispheres 24.1
2729 Female, age 91, right hemisphere 18.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.9
Samples: 197

Max nTPM: 83.3
Min nTPM: 4.6
Std nTPM: 10.9
Median nTPM: 22.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 83.3
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 72.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 66.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 56.4
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 54.5
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 51.2
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 51.0
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 50.4
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 49.2
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 48.9
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 47.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 7.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 7.6
FF:10153-102I9 76 years, female 11.1
FF:10169-103B7 60 years, female 4.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 27.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 26.0
Samples: 4

Max nTPM: 30.2
Min nTPM: 18.6
Sample A Female 30.2
Sample B Female 28.8
Sample C Male 18.6
Sample D Male 26.5
Entorhinal cortex
nTPM: 27.2
Samples: 4

Max nTPM: 29.6
Min nTPM: 24.8
Sample A Female 29.6
Sample B Female 25.7
Sample C Male 24.8
Sample D Male 28.7
Subiculum
nTPM: 17.8
Samples: 4

Max nTPM: 24.1
Min nTPM: 12.7
Sample A Female 24.1
Sample B Female 12.7
Sample C Male 17.4
Sample D Male 16.9
Ventral hippocampus
nTPM: 21.5
Samples: 4

Max nTPM: 26.2
Min nTPM: 17.7
Sample A Female 18.7
Sample B Female 17.7
Sample C Male 23.2
Sample D Male 26.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 9.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.4
Samples: 4

Max nTPM: 12.3
Min nTPM: 7.7
Sample A Male 7.7
Sample B Male 8.0
Sample C Female 9.7
Sample D Female 12.3
Hippocampal formation
nTPM: 8.7
Samples: 4

Max nTPM: 10.1
Min nTPM: 7.2
Sample A Male 7.2
Sample B Male 9.8
Sample C Female 10.1
Sample D Female 7.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
69873720 Antisense, RP_050512_01_H01, Mouse strain C57BL/6J (56 days, male) 1.5
70305544 Antisense, RP_050609_04_E02, Mouse strain C57BL/6J (56 days, male) 0.4

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The Human Protein Atlas

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