HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:15.3 nTPM
HPA:15.3 nTPM
GTEx:15.3 nTPM
FANTOM5:27.5 Scaled Tags Per Million
Pig:27.4 nTPM
Mouse:20.3 nTPM
Allen mouse:4.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030419Antibody HPA030420Antibody HPA030422Antibody CAB025196
Glial cells Not detectedNot detectedNot detectedNot detected
Neuronal cells Not detectedNot detectedMediumMedium









HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.3
Sample id Sample description nTPM
Hippocampus
nTPM: 13.7
1898 Male, age 80, left hemisphere 14.4
1855 Male, age 76, left hemisphere 14.0
2529 Female, age 94, left hemisphere 13.5
1911 Female, age 85, right hemisphere 13.4
2148 Female, age 91, left hemisphere 13.4
2621 Female, age 67, right hemisphere 13.2
Dentate gyrus
nTPM: 14.0
2010 Male, age 76, both hemispheres 15.6
2528 Male, age 74, both hemispheres 14.7
2531 Female, age 67, both hemispheres 14.3
1927 Female, age 91, both hemispheres 14.1
2246 Female, age 85, both hemispheres 13.3
2530 Female, age 94, left hemisphere 12.0
Entorhinal gyrus
nTPM: 12.7
2764 Male, age 80, right hemisphere 13.7
1787 Male, age 76, left hemisphere 13.6
1938 Female, age 85, left hemisphere 13.1
2117 Female, age 91, right hemisphere 13.0
2613 Female, age 94, left hemisphere 12.1
2686 Male, age 75, right hemisphere 10.9
Hippocampus, CA1
nTPM: 15.3
2749 Male, age 80, left hemisphere 20.0
2045 Male, age 76, both hemispheres 15.5
2527 Male, age 74, both hemispheres 14.6
1873 Female, age 85, both hemispheres 14.3
2082 Female, age 91, right hemisphere 12.3
Hippocampus, CA2
nTPM: 13.8
2249 Male, age 74, both hemispheres 14.8
1963 Male, age 80, left hemisphere 14.6
1892 Male, age 76, both hemispheres 14.4
2437 Female, age 94, left hemisphere 13.3
1940 Female, age 85, left hemisphere 13.1
2113 Female, age 91, right hemisphere 12.8
Hippocampus, CA3
nTPM: 14.2
2137 Male, age 80, left hemisphere 16.2
1867 Male, age 76, both hemispheres 15.4
2620 Female, age 94, left hemisphere 14.3
2436 Male, age 74, both hemispheres 14.2
1891 Female, age 85, both hemispheres 13.2
2861 Female, age 67, both hemispheres 12.1
Parahippocampal cortex
nTPM: 12.7
2018 Male, age 76, both hemispheres 14.0
1933 Female, age 85, both hemispheres 13.8
1850 Male, age 80, both hemispheres 13.4
2250 Female, age 67, right hemisphere 13.3
1990 Female, age 91, right hemisphere 13.2
2692 Male, age 74, both hemispheres 13.0
2245 Female, age 91, both hemispheres 12.7
2532 Female, age 72, left hemisphere 11.8
2622 Female, age 67, right hemisphere 11.2
2693 Female, age 94, both hemispheres 10.8
Perirhinal gyrus
nTPM: 13.9
1847 Female, age 91, left hemisphere 15.6
2521 Female, age 94, right hemisphere 14.2
1794 Male, age 80, right hemisphere 14.1
1841 Female, age 85, right hemisphere 13.2
2848 Male, age 76, right hemisphere 12.2
Subiculum
nTPM: 13.0
1977 Female, age 85, both hemispheres 13.4
1901 Male, age 80, both hemispheres 13.2
2619 Male, age 74, both hemispheres 13.2
2729 Female, age 91, right hemisphere 12.9
2438 Female, age 94, left hemisphere 12.6
2042 Male, age 76, both hemispheres 12.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.3
Samples: 197

Max nTPM: 22.9
Min nTPM: 9.8
Std nTPM: 2.8
Median nTPM: 14.8
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 22.9
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 22.8
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 22.7
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 22.4
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 22.0
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 21.1
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 21.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 20.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 20.6
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 20.5
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 20.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.5
FF:10153-102I9 76 years, female 27.8
FF:10169-103B7 60 years, female 27.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 27.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 23.2
Samples: 4

Max nTPM: 28.9
Min nTPM: 18.1
Sample A Female 28.9
Sample B Female 25.8
Sample C Male 18.1
Sample D Male 19.9
Entorhinal cortex
nTPM: 18.5
Samples: 4

Max nTPM: 20.2
Min nTPM: 16.7
Sample A Female 20.2
Sample B Female 19.0
Sample C Male 18.1
Sample D Male 16.7
Subiculum
nTPM: 18.0
Samples: 4

Max nTPM: 19.4
Min nTPM: 16.6
Sample A Female 19.4
Sample B Female 17.6
Sample C Male 18.4
Sample D Male 16.6
Ventral hippocampus
nTPM: 27.4
Samples: 4

Max nTPM: 36.4
Min nTPM: 18.7
Sample A Female 36.4
Sample B Female 18.7
Sample C Male 34.3
Sample D Male 20.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 20.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.4
Samples: 4

Max nTPM: 17.2
Min nTPM: 12.2
Sample A Male 12.2
Sample B Male 14.3
Sample C Female 14.0
Sample D Female 17.2
Hippocampal formation
nTPM: 20.3
Samples: 4

Max nTPM: 23.5
Min nTPM: 17.9
Sample A Male 17.9
Sample B Male 18.7
Sample C Female 23.5
Sample D Female 21.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.5
70195054 Antisense, RP_050517_02_C07, Mouse strain C57BL/6J (56 days, male) 4.5

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The Human Protein Atlas

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