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RPL28
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  • TISSUE

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  • RPL28
PATHOLOGY OVARIAN CANCER Show tissue menu
BREAST CANCER CARCINOID CERVICAL CANCER COLORECTAL CANCER ENDOMETRIAL CANCER GLIOMA HEAD AND NECK CANCER LIVER CANCER LUNG CANCER LYMPHOMA
MELANOMA OVARIAN CANCER PANCREATIC CANCER PROSTATE CANCER RENAL CANCER SKIN CANCER STOMACH CANCER TESTIS CANCER THYROID CANCER UROTHELIAL CANCER
ANTIBODIES
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VALIDATION
Dictionary
Ovarian cancer
Human pathology
Ovarian cancer
OVARIAN CANCER - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

Read more
RPL28 is not prognostic in ovarian cancer


Stage:
Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

Read more
: 464.58
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

Read more
: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average FPKM 370.2
Number of samples 373
Samples
Sample Description FPKM
TCGA-13-1496-01A 65 years, female, white, dead, 129 days 1642.7
TCGA-23-1022-01A 67 years, female, white, dead, 1511 days 1486.1
TCGA-23-1028-01A 43 years, female, white, alive, 1503 days 1218.2
TCGA-24-1431-01A 67 years, female, white, dead, 567 days 1198.3
TCGA-13-0901-01B 42 years, female, asian, alive, 589 days 1131.6
TCGA-13-1501-01A 50 years, female, white, dead, 1314 days 1127.2
TCGA-10-0931-01A 44 years, female, white, dead, 1000 days 1044.6
TCGA-13-0923-01A 74 years, female, white, alive, 2547 days 973.6
TCGA-13-1509-01A 64 years, female, white, alive, 2438 days 915.9
TCGA-09-0367-01A 67 years, female, native hawaiian or other pacific islander, dead, 547 days 871.5
TCGA-23-1113-01A 48 years, female, white, dead, 949 days 853.1
TCGA-13-0924-01A 45 years, female, white, alive, 2614 days 847.4
TCGA-13-0795-01A 66 years, female, white, dead, 619 days 844.9
TCGA-10-0938-01A 80 years, female, white, dead, 636 days 841.5
TCGA-04-1350-01A 46 years, female, white, dead, 1946 days 834.9
TCGA-04-1341-01A 85 years, female, white, alive, 33 days 832.9
TCGA-30-1866-01A 61 years, female, white, dead, 1114 days 830.6
TCGA-23-1107-01A 59 years, female, white, dead, 9 days 811.7
TCGA-24-2023-01A 54 years, female, white, dead, 1364 days 799.9
TCGA-61-2110-01A 56 years, female, white, dead, 1354 days 774.2
TCGA-13-0884-01B 39 years, female, white, dead, 3260 days 768.2
TCGA-24-1428-01A 50 years, female, white, alive, 529 days 759.4
TCGA-25-1317-01A 66 years, female, white, dead, 61 days 752.5
TCGA-04-1347-01A 81 years, female, white, alive, 1919 days 751.4
TCGA-13-0724-01A 72 years, female, white, dead, 83 days 746.6
TCGA-13-0885-01A 70 years, female, white, alive, 3388 days 746.3
TCGA-13-1477-01A 49 years, female, white, dead, 1662 days 744.8
TCGA-09-1659-01B 51 years, female, white, dead, 304 days 737.3
TCGA-30-1892-01A 52 years, female, white, dead, 1484 days 734.6
TCGA-10-0927-01A 65 years, female, dead, 2490 days 727.1
TCGA-24-2033-01A 87 years, female, white, dead, 562 days 725.7
TCGA-13-0891-01A 73 years, female, white, dead, 3128 days 716.2
TCGA-13-1409-01A 73 years, female, white, dead, 1742 days 705.9
TCGA-29-1768-01A 50 years, female, white, dead, 952 days 690.0
TCGA-04-1343-01A 72 years, female, white, dead, 361 days 688.9
TCGA-29-1761-01A 80 years, female, asian, dead, 528 days 680.6
TCGA-23-1021-01B 45 years, female, white, dead, 1446 days 672.2
TCGA-29-1777-01A 47 years, female, white, alive, 374 days 667.3
TCGA-25-1630-01A 73 years, female, white, dead, 1162 days 666.0
TCGA-10-0937-01A 44 years, female, white, dead, 608 days 662.5
TCGA-13-1507-01A 77 years, female, white, dead, 1993 days 658.9
TCGA-25-1312-01A 69 years, female, white, dead, 31 days 657.7
TCGA-24-1923-01A 51 years, female, white, dead, 690 days 655.1
TCGA-24-1845-01A 42 years, female, white, alive, 116 days 650.7
TCGA-04-1542-01A 52 years, female, white, dead, 2561 days 650.1
TCGA-24-1471-01A 60 years, female, white, alive, 36 days 645.3
TCGA-30-1853-01A 58 years, female, white, dead, 1103 days 644.7
TCGA-13-1487-01A 74 years, female, white, dead, 681 days 639.3
TCGA-24-2038-01A 68 years, female, white, dead, 1354 days 639.0
TCGA-24-1553-01A 53 years, female, white, dead, 1767 days 637.3
TCGA-13-0804-01A 74 years, female, white, dead, 1073 days 634.6
TCGA-04-1338-01A 78 years, female, white, alive, 1418 days 626.0
TCGA-13-0920-01A 65 years, female, white, dead, 1484 days 617.8
TCGA-24-0970-01B 63 years, female, white, dead, 354 days 606.2
TCGA-25-2393-01A 81 years, female, white, dead, 1157 days 595.0
TCGA-29-1688-01A 39 years, female, white, dead, 2400 days 589.6
TCGA-13-1483-01A 61 years, female, white, dead, 895 days 584.3
TCGA-61-1911-01A 55 years, female, white, alive, 1293 days 581.1
TCGA-23-1118-01A 45 years, female, white, alive, 2616 days 579.0
TCGA-13-1410-01A 57 years, female, white, alive, 2464 days 576.7
TCGA-09-1670-01A 57 years, female, white, alive, 547 days 562.0
TCGA-04-1651-01A 53 years, female, white, dead, 1102 days 558.5
TCGA-13-1408-01A 59 years, female, white, dead, 1680 days 557.3
TCGA-57-1583-01A 57 years, female, black or african american, dead, 346 days 556.4
TCGA-25-1323-01A 72 years, female, white, dead, 395 days 555.9
TCGA-13-1489-01A 70 years, female, white, dead, 2553 days 553.3
TCGA-13-0725-01A 44 years, female, white, dead, 377 days 545.7
TCGA-24-1426-01A 43 years, female, white, alive, 163 days 544.3
TCGA-23-1026-01B 45 years, female, white, alive, 816 days 543.6
TCGA-13-0727-01A 71 years, female, white, dead, 462 days 537.0
TCGA-23-1111-01A 63 years, female, white, alive, 98 days 519.6
TCGA-36-1568-01A 52 years, female, alive, 875 days 512.2
TCGA-25-1313-01A 62 years, female, white, dead, 820 days 508.8
TCGA-59-2350-01A female, dead, 679 days 506.1
TCGA-29-1766-01A 74 years, female, white, dead, 1199 days 504.0
TCGA-09-2053-01C 72 years, female, white, alive, 1209 days 502.8
TCGA-25-1877-01A 81 years, female, white, dead, 730 days 502.5
TCGA-24-1464-01A 70 years, female, white, dead, 379 days 499.1
TCGA-09-1661-01B 75 years, female, white, dead, 1169 days 495.6
TCGA-04-1655-01A 49 years, female, white, dead, 1380 days 490.9
TCGA-25-1634-01A 76 years, female, white, dead, 1091 days 488.0
TCGA-23-1116-01A 83 years, female, white, dead, 592 days 487.3
TCGA-24-1416-01A 34 years, female, white, alive, 194 days 484.2
TCGA-61-1907-01A 63 years, female, white, alive, 952 days 482.4
TCGA-25-1328-01A 38 years, female, white, dead, 2009 days 477.6
TCGA-24-1562-01A 67 years, female, white, dead, 1384 days 475.3
TCGA-13-0765-01A 50 years, female, white, dead, 1389 days 471.5
TCGA-29-1769-01A 40 years, female, white, alive, 699 days 470.7
TCGA-29-1701-01A 56 years, female, white, dead, 515 days 468.3
TCGA-25-1329-01A 76 years, female, white, dead, 457 days 465.4
TCGA-13-0887-01A 42 years, female, white, dead, 2028 days 463.8
TCGA-13-0762-01A 65 years, female, white, alive, 3400 days 463.5
TCGA-29-1703-01A 56 years, female, black or african american, dead, 1815 days 462.6
TCGA-23-1027-01A 48 years, female, white, dead, 976 days 459.2
TCGA-61-2008-01A 40 years, female, asian, alive, 932 days 458.2
TCGA-13-0905-01B 51 years, female, white, alive, 3746 days 453.6
TCGA-29-1770-01A 54 years, female, white, alive, 741 days 447.0
TCGA-23-2077-01A 45 years, female, white, alive, 3525 days 445.5
TCGA-13-1488-01A 59 years, female, white, dead, 2154 days 445.4
TCGA-13-1497-01A 48 years, female, white, alive, 3871 days 445.0
TCGA-20-0991-01A 78 years, female, white, alive, 797 days 442.4
TCGA-13-0766-01A 42 years, female, white, dead, 1725 days 442.0
TCGA-61-2092-01A 57 years, female, white, alive, 1573 days 439.4
TCGA-25-1316-01A 55 years, female, white, dead, 1279 days 439.1
TCGA-13-1506-01A 45 years, female, white, dead, 1039 days 437.4
TCGA-13-0900-01B 59 years, female, white, alive, 4077 days 437.4
TCGA-04-1361-01A 57 years, female, white, alive, 989 days 431.8
TCGA-23-1024-01A 52 years, female, white, alive, 468 days 431.4
TCGA-29-1783-01A 58 years, female, white, alive, 220 days 430.9
TCGA-13-0720-01A 48 years, female, white, dead, 1355 days 430.5
TCGA-09-1669-01A 54 years, female, white, alive, 928 days 426.0
TCGA-61-1721-01A 38 years, female, white, alive, 338 days 424.0
TCGA-13-1510-01A 62 years, female, white, dead, 1359 days 423.6
TCGA-13-1512-01A 49 years, female, white, alive, 442 days 422.6
TCGA-23-1119-01A 64 years, female, white, alive, 3953 days 421.8
TCGA-24-1616-01A 56 years, female, white, dead, 1163 days 418.2
TCGA-23-2084-01A 45 years, female, white, dead, 1516 days 413.9
TCGA-24-0966-01A 78 years, female, black or african american, alive, 232 days 413.1
TCGA-30-1891-01A 61 years, female, white, dead, 914 days 410.3
TCGA-13-1499-01A 56 years, female, white, alive, 3500 days 409.4
TCGA-24-1551-01A 53 years, female, white, dead, 1579 days 408.0
TCGA-61-1919-01A 58 years, female, white, dead, 1161 days 407.3
TCGA-13-0797-01A 49 years, female, white, alive, 2121 days 407.0
TCGA-09-1666-01A 57 years, female, white, alive, 1752 days 403.9
TCGA-61-1738-01A 60 years, female, black or african american, dead, 1089 days 402.8
TCGA-13-0911-01A 55 years, female, white, dead, 1355 days 402.4
TCGA-61-1725-01A 40 years, female, white, alive, 956 days 402.3
TCGA-24-0982-01A 77 years, female, white, dead, 679 days 401.0
TCGA-29-1690-01A 66 years, female, white, dead, 1448 days 400.9
TCGA-09-2056-01B 62 years, female, white, alive, 379 days 399.5
TCGA-23-1109-01A 63 years, female, white, dead, 1562 days 396.3
TCGA-29-1784-01A 55 years, female, white, alive, 163 days 395.9
TCGA-24-1103-01A 50 years, female, black or african american, dead, 1646 days 395.2
TCGA-25-2401-01A 64 years, female, white, dead, 90 days 392.3
TCGA-09-2044-01B 77 years, female, asian, alive, 186 days 391.1
TCGA-04-1536-01A 60 years, female, black or african american, dead, 885 days 390.2
TCGA-24-1924-01A 65 years, female, white, dead, 919 days 390.0
TCGA-13-0906-01A 50 years, female, white, alive, 3619 days 385.5
TCGA-24-2267-01A 58 years, female, white, dead, 1446 days 381.4
TCGA-13-1407-01A 51 years, female, white, alive, 2534 days 379.7
TCGA-13-0714-01A 55 years, female, white, dead, 189 days 373.8
TCGA-29-2428-01A 58 years, female, white, alive, 1372 days 370.8
TCGA-59-2363-01A female, asian, alive, 165 days 365.3
TCGA-29-2414-01A 75 years, female, white, dead, 2621 days 364.7
TCGA-13-1492-01A 66 years, female, white, dead, 3819 days 363.1
TCGA-23-1120-01A 60 years, female, white, alive, 130 days 360.9
TCGA-24-1842-01A 49 years, female, white, alive, 253 days 359.4
TCGA-13-0916-01A 49 years, female, white, alive, 1785 days 358.3
TCGA-25-1631-01A 73 years, female, white, dead, 9 days 356.4
TCGA-29-1785-01A 55 years, female, white, dead, 1104 days 354.0
TCGA-59-2351-01A female, white, alive, 3532 days 353.3
TCGA-61-1914-01A 65 years, female, alive, 1722 days 352.2
TCGA-59-2352-01A female, white, dead, 286 days 351.3
TCGA-10-0936-01A 69 years, female, black or african american, dead, 1123 days 351.1
TCGA-61-1910-01A 56 years, female, white, alive, 1127 days 349.2
TCGA-09-1662-01A 58 years, female, white, dead, 2717 days 348.1
TCGA-30-1862-01A 65 years, female, white, dead, 186 days 347.1
TCGA-10-0933-01A 77 years, female, white, dead, 446 days 346.3
TCGA-61-1736-01B 45 years, female, white, dead, 1484 days 344.7
TCGA-13-1404-01A 48 years, female, white, alive, 2469 days 343.8
TCGA-09-1665-01B 74 years, female, white, dead, 1266 days 342.7
TCGA-24-1104-01A 56 years, female, white, dead, 1933 days 342.3
TCGA-13-0888-01A 78 years, female, white, dead, 2811 days 341.1
TCGA-30-1857-01A 64 years, female, white, dead, 8 days 340.4
TCGA-24-1419-01A 62 years, female, white, alive, 239 days 339.9
TCGA-61-2101-01A 55 years, female, white, dead, 1688 days 337.9
TCGA-29-1781-01A 69 years, female, white, alive, 255 days 331.9
TCGA-29-1776-01A 63 years, female, black or african american, alive, 360 days 331.7
TCGA-29-2425-01A 60 years, female, white, alive, 1977 days 329.7
TCGA-13-1495-01A 60 years, female, white, dead, 2749 days 329.5
TCGA-13-A5FT-01A 67 years, female, black or african american, alive, 2143 days 327.2
TCGA-20-1687-01A 46 years, female, white, alive, 81 days 327.1
TCGA-25-1633-01A 64 years, female, white, dead, 1891 days 326.2
TCGA-61-2109-01A 40 years, female, white, dead, 629 days 323.8
TCGA-61-1995-01A 43 years, female, white, alive, 61 days 322.5
TCGA-25-2396-01A 71 years, female, white, dead, 92 days 321.1
TCGA-57-1586-01A 66 years, female, white, alive, 679 days 320.7
TCGA-WR-A838-01A 72 years, female, black or african american, dead, 304 days 319.9
TCGA-29-1762-01A 59 years, female, white, dead, 2634 days 319.7
TCGA-13-1498-01A 73 years, female, white, dead, 2012 days 319.5
TCGA-04-1519-01A 48 years, female, alive, 24 days 319.2
TCGA-24-1603-01A 53 years, female, white, dead, 2742 days 315.6
TCGA-04-1332-01A 70 years, female, white, dead, 1247 days 314.8
TCGA-24-1105-01A 36 years, female, white, dead, 1442 days 314.5
TCGA-61-2009-01A 65 years, female, white, alive, 1212 days 312.6
TCGA-10-0928-01A 71 years, female, white, dead, 563 days 312.3
TCGA-24-2262-01A 57 years, female, white, dead, 11 days 312.1
TCGA-59-2355-01A female, white, dead, 65 days 312.0
TCGA-25-2391-01A 57 years, female, white, dead, 1492 days 312.0
TCGA-24-0979-01A 53 years, female, white, dead, 1264 days 307.2
TCGA-20-1686-01A 75 years, female, white, alive, 89 days 307.2
TCGA-25-1322-01A 62 years, female, white, dead, 91 days 305.0
TCGA-30-1860-01A 58 years, female, white, dead, 1366 days 304.7
TCGA-13-1405-01A 49 years, female, white, dead, 868 days 304.1
TCGA-23-1030-01A 64 years, female, white, alive, 886 days 303.5
TCGA-24-2281-01A 68 years, female, white, alive, 1357 days 303.1
TCGA-23-1023-01A 65 years, female, white, alive, 1233 days 300.0
TCGA-29-1710-01A 54 years, female, white, dead, 951 days 299.7
TCGA-24-1422-01A 82 years, female, black or african american, dead, 23 days 299.5
TCGA-29-1693-01A 72 years, female, white, alive, 3096 days 299.2
TCGA-61-1918-01A 45 years, female, white, dead, 479 days 298.6
TCGA-36-1569-01A 52 years, female, white, alive, 885 days 296.8
TCGA-61-1733-01A 71 years, female, white, alive, 967 days 296.5
TCGA-13-1485-01A 48 years, female, white, dead, 629 days 296.0
TCGA-13-0883-01A 61 years, female, white, dead, 2097 days 293.8
TCGA-24-1546-01A 46 years, female, white, dead, 1955 days 292.7
TCGA-13-2060-01A 51 years, female, white, alive, 2369 days 288.6
TCGA-36-1580-01A 82 years, female, dead, 737 days 288.5
TCGA-24-1930-01A 53 years, female, white, dead, 2467 days 288.4
TCGA-29-1774-01A 82 years, female, white, alive, 527 days 288.2
TCGA-61-1900-01A 51 years, female, black or african american, alive, 176 days 287.8
TCGA-24-2280-01A 74 years, female, white, alive, 2143 days 286.2
TCGA-24-2288-01A 70 years, female, white, dead, 25 days 285.7
TCGA-30-1861-01A 74 years, female, white, dead, 1058 days 285.6
TCGA-04-1364-01A 61 years, female, white, dead, 1024 days 284.0
TCGA-24-2261-01A 76 years, female, white, dead, 24 days 280.6
TCGA-24-2020-01A 67 years, female, white, dead, 4624 days 280.4
TCGA-24-1843-01A 67 years, female, white, alive, 106 days 280.1
TCGA-09-1667-01C 61 years, female, white, alive, 1882 days 277.5
TCGA-31-1953-01A 52 years, female, asian, alive, 204 days 276.2
TCGA-24-1850-01A 72 years, female, white, alive, 168 days 275.3
TCGA-36-1577-01A 43 years, female, asian, alive, 783 days 273.9
TCGA-25-1318-01A 54 years, female, white, dead, 1064 days 273.9
TCGA-04-1514-01A 45 years, female, white, dead, 1720 days 273.6
TCGA-23-1110-01A 42 years, female, white, alive, 1658 days 273.3
TCGA-61-1737-01A 42 years, female, white, alive, 1364 days 270.6
TCGA-25-2399-01A 80 years, female, white, dead, 608 days 270.0
TCGA-24-1413-01A 51 years, female, white, alive, 192 days 269.5
TCGA-13-0886-01A 67 years, female, white, alive, 4665 days 267.5
TCGA-29-1711-01A 45 years, female, black or african american, alive, 1053 days 267.1
TCGA-24-1552-01A 77 years, female, white, dead, 1259 days 265.0
TCGA-13-0893-01B 48 years, female, black or african american, dead, 1319 days 264.1
TCGA-23-1809-01A 63 years, female, white, alive, 16 days 262.1
TCGA-09-0364-01A 80 years, female, white, dead, 887 days 262.1
TCGA-24-1430-01A 68 years, female, white, dead, 863 days 262.0
TCGA-61-1998-01A 48 years, female, white, alive, 168 days 261.6
TCGA-24-0968-01A 59 years, female, white, dead, 598 days 261.4
TCGA-23-1122-01A 53 years, female, white, dead, 1189 days 260.7
TCGA-30-1718-01A 44 years, female, white, dead, 1579 days 259.6
TCGA-24-2035-01A 65 years, female, white, dead, 857 days 258.8
TCGA-29-1778-01A 77 years, female, white, alive, 454 days 258.1
TCGA-24-1846-01A 45 years, female, alive, 133 days 255.8
TCGA-13-1411-01A 81 years, female, white, dead, 531 days 253.3
TCGA-23-2078-01A 66 years, female, white, alive, 2661 days 251.5
TCGA-23-1029-01B 46 years, female, white, alive, 268 days 251.2
TCGA-24-1427-01A 58 years, female, alive, 147 days 248.0
TCGA-20-0987-01A 61 years, female, white, dead, 701 days 247.4
TCGA-09-2045-01A 50 years, female, asian, dead, 1069 days 244.8
TCGA-24-2024-01A 72 years, female, black or african american, dead, 1769 days 244.6
TCGA-24-1417-01A 54 years, female, white, alive, 238 days 242.7
TCGA-25-1870-01A 59 years, female, white, dead, 455 days 239.5
TCGA-24-1565-01A 74 years, female, white, dead, 312 days 238.9
TCGA-24-1550-01A 49 years, female, white, dead, 1249 days 238.1
TCGA-09-0369-01A 56 years, female, white, dead, 1082 days 238.0
TCGA-25-1321-01A 65 years, female, white, dead, 1033 days 236.0
TCGA-29-1695-01A 62 years, female, white, dead, 1229 days 235.9
TCGA-13-1505-01A 63 years, female, white, alive, 1998 days 235.1
TCGA-04-1331-01A 79 years, female, white, dead, 1336 days 234.3
TCGA-24-1604-01A 67 years, female, white, dead, 2688 days 234.1
TCGA-57-1585-01A 57 years, female, white, dead, 53 days 233.6
TCGA-24-2290-01A 56 years, female, white, dead, 1102 days 233.1
TCGA-20-1682-01A 56 years, female, white, alive, 837 days 231.0
TCGA-29-1696-01A 43 years, female, white, dead, 1032 days 231.0
TCGA-24-1418-01A 68 years, female, white, alive, 243 days 230.3
TCGA-61-1728-01A 59 years, female, white, alive, 848 days 229.2
TCGA-24-2271-01A 55 years, female, asian, dead, 962 days 229.1
TCGA-57-1584-01A 47 years, female, white, alive, 643 days 229.1
TCGA-13-0768-01A 73 years, female, white, dead, 1784 days 227.8
TCGA-13-1403-01A 48 years, female, white, dead, 2345 days 226.4
TCGA-24-1560-01A 51 years, female, white, dead, 1341 days 225.9
TCGA-30-1714-01A 68 years, female, white, dead, 1158 days 224.1
TCGA-13-0897-01A 54 years, female, white, dead, 2182 days 221.1
TCGA-29-1705-01A 48 years, female, white, dead, 555 days 219.2
TCGA-61-1741-01A 76 years, female, white, dead, 1024 days 219.0
TCGA-24-1563-01A 66 years, female, black or african american, dead, 1451 days 218.8
TCGA-25-1632-01A 68 years, female, white, dead, 1799 days 217.1
TCGA-24-1567-01A 54 years, female, white, dead, 524 days 215.8
TCGA-25-2404-01A 38 years, female, american indian or alaska native, dead, 883 days 215.4
TCGA-25-1315-01A 50 years, female, white, dead, 1583 days 214.8
TCGA-24-1844-01A 64 years, female, white, alive, 113 days 214.0
TCGA-57-1582-01A female, white, dead, 731 days 213.6
TCGA-VG-A8LO-01A 55 years, female, black or african american, dead, 24 days 211.9
TCGA-25-1623-01A 71 years, female, white, dead, 565 days 210.1
TCGA-04-1356-01A 62 years, female, white, dead, 1499 days 209.1
TCGA-61-2012-01A 81 years, female, white, alive, 932 days 208.3
TCGA-61-1724-01A 47 years, female, white, dead, 637 days 208.0
TCGA-31-1959-01A 49 years, female, white, alive, 67 days 207.0
TCGA-59-2348-01A female, white, alive, 5481 days 204.9
TCGA-04-1362-01A 59 years, female, white, dead, 1348 days 204.6
TCGA-25-2409-01A 71 years, female, white, dead, 821 days 203.2
TCGA-61-2002-01A 46 years, female, white, alive, 547 days 202.0
TCGA-59-2354-01A female, white, dead, 1046 days 201.4
TCGA-09-2048-01A 63 years, female, white, dead, 138 days 200.6
TCGA-24-2297-01A 56 years, female, white, dead, 1699 days 199.7
TCGA-24-1423-01A 61 years, female, white, alive, 190 days 198.7
TCGA-25-1627-01A 73 years, female, white, dead, 394 days 198.3
TCGA-24-2026-01A 79 years, female, white, dead, 1059 days 195.8
TCGA-31-1951-01A 58 years, female, white, alive, 684 days 195.0
TCGA-25-1626-01A 65 years, female, white, dead, 518 days 193.8
TCGA-61-2000-01A 67 years, female, white, alive, 441 days 193.1
TCGA-31-1956-01A 60 years, female, white, alive, 1342 days 192.9
TCGA-23-1114-01B 55 years, female, white, dead, 2089 days 190.2
TCGA-24-1544-01A 71 years, female, black or african american, dead, 820 days 190.1
TCGA-61-2003-01A 53 years, female, white, alive, 122 days 187.2
TCGA-36-1576-01A 76 years, female, alive, 915 days 185.5
TCGA-29-2427-01A 60 years, female, white, alive, 1900 days 185.2
TCGA-24-2027-01A 51 years, female, white, dead, 3337 days 182.3
TCGA-09-0366-01A 56 years, female, white, dead, 1757 days 182.1
TCGA-13-0726-01A 55 years, female, white, dead, 949 days 181.3
TCGA-29-1763-01A 43 years, female, black or african american, alive, 2032 days 179.2
TCGA-13-0730-01A 71 years, female, white, dead, 542 days 178.9
TCGA-24-2254-01A 66 years, female, white, dead, 1736 days 178.4
TCGA-24-1434-01A 59 years, female, white, dead, 568 days 177.8
TCGA-04-1365-01A 87 years, female, white, alive, 2329 days 177.4
TCGA-36-1571-01A 53 years, female, white, dead, 695 days 176.6
TCGA-20-1683-01A 65 years, female, white, alive, 772 days 176.2
TCGA-31-1944-01A 47 years, female, white, alive, 1386 days 175.9
TCGA-25-2392-01A 75 years, female, white, dead, 31 days 175.6
TCGA-25-2398-01A 71 years, female, white, dead, 1369 days 175.2
TCGA-24-1928-01A 77 years, female, white, dead, 336 days 170.6
TCGA-61-2111-01A 61 years, female, white, alive, 3825 days 170.3
TCGA-61-2104-01A 53 years, female, white, alive, 2338 days 167.9
TCGA-24-1424-01A 67 years, female, white, alive, 183 days 167.9
TCGA-24-2036-01A 50 years, female, white, dead, 1947 days 166.0
TCGA-29-1694-01A 45 years, female, white, dead, 1187 days 165.6
TCGA-29-1697-01A 62 years, female, white, dead, 949 days 165.0
TCGA-25-2400-01A 76 years, female, white, dead, 1278 days 164.8
TCGA-24-1469-01A 71 years, female, white, alive, 277 days 164.4
TCGA-23-1123-01A 59 years, female, white, dead, 1018 days 164.3
TCGA-09-2054-01A 58 years, female, black or african american, dead, 637 days 160.3
TCGA-24-1847-01A 45 years, female, white, alive, 343 days 159.5
TCGA-29-1691-01A 51 years, female, white, dead, 1470 days 159.1
TCGA-25-1326-01A 61 years, female, white, dead, 1249 days 157.7
TCGA-31-1946-01A 30 years, female, alive, 918 days 156.7
TCGA-25-2042-01A 60 years, female, american indian or alaska native, dead, 396 days 155.4
TCGA-24-1467-01A 51 years, female, white, dead, 3224 days 155.4
TCGA-61-2098-01A 62 years, female, white, alive, 1993 days 153.0
TCGA-09-2051-01A 42 years, female, white, alive, 1919 days 151.4
TCGA-61-2113-01A 54 years, female, white, dead, 676 days 151.3
TCGA-24-1425-01A 45 years, female, white, alive, 181 days 151.1
TCGA-25-1320-01A 65 years, female, white, dead, 1155 days 150.6
TCGA-13-1511-01A 52 years, female, asian, dead, 1650 days 150.3
TCGA-24-2293-01A 47 years, female, white, dead, 506 days 150.3
TCGA-36-1570-01A 49 years, female, white, alive, 655 days 150.1
TCGA-13-0800-01A 52 years, female, white, alive, 2661 days 145.8
TCGA-09-1673-01A 50 years, female, white, alive, 92 days 145.1
TCGA-25-1635-01A 71 years, female, white, dead, 1583 days 143.0
TCGA-13-0908-01B 58 years, female, white, dead, 1843 days 140.4
TCGA-25-1628-01A 67 years, female, white, dead, 627 days 136.7
TCGA-61-2088-01A 51 years, female, white, alive, 145 days 135.4
TCGA-24-1435-01A 57 years, female, white, dead, 1324 days 134.1
TCGA-04-1530-01A 68 years, female, white, dead, 3622 days 131.1
TCGA-24-1557-01A 49 years, female, white, dead, 1213 days 127.5
TCGA-31-1950-01A 76 years, female, white, alive, 571 days 126.4
TCGA-25-1319-01A 73 years, female, white, dead, 1977 days 122.8
TCGA-24-1470-01A 54 years, female, white, alive, 105 days 121.7
TCGA-24-1474-01A 57 years, female, black or african american, dead, 676 days 121.6
TCGA-57-1994-01A 63 years, female, white, alive, 761 days 121.6
TCGA-24-2289-01A 69 years, female, white, dead, 2049 days 116.8
TCGA-61-2097-01A 71 years, female, white, alive, 1844 days 116.3
TCGA-24-1549-01A 58 years, female, white, dead, 1721 days 110.0
TCGA-24-2298-01A 56 years, female, white, dead, 1620 days 108.8
TCGA-04-1648-01A 57 years, female, white, dead, 871 days 106.7
TCGA-36-1574-01A 48 years, female, asian, alive, 686 days 100.7
TCGA-5X-AA5U-01A 61 years, female, black or african american, alive, 361 days 99.6
TCGA-24-1558-01A 73 years, female, white, dead, 594 days 97.0
TCGA-57-1993-01A 56 years, female, white, alive, 763 days 93.6
TCGA-09-1668-01B 57 years, female, white, alive, 1684 days 93.1
TCGA-29-A5NZ-01A 66 years, female, black or african american, dead, 1088 days 90.9
TCGA-OY-A56Q-01A 78 years, female, black or african american, alive, 576 days 90.2
TCGA-61-2102-01A 74 years, female, white, dead, 197 days 89.4
TCGA-36-1581-01A 63 years, female, white, alive, 751 days 71.2
TCGA-59-A5PD-01A 55 years, female, black or african american, dead, 624 days 62.4
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OVARIAN CANCER - Protein expressioni

A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.

Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

 

Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more

Antibody HPA050459
 Staining
  High
  Medium
  Low
  Not detected
 Intensity
  Strong
  Moderate
  Weak
  Negative
 Quantity
  >75%
  75%-25%
  <25%
  None
 Location
  Nuclear
  Cytoplasmic/membranous
  Cytoplasmic/membranous,nuclear
  None
Click images for details

Contact

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The Human Protein Atlas

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.