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RPL28
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TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glandular cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1467.4 nTPM
HPA:773.3 nTPM
GTEx:1467.4 nTPM
FANTOM5:1710.5 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA050459
Glandular cells High


SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 773.3
overview
Male, age 65
Small intestine sample 232
nTPM: 966
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 727.1
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 745
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 655.3

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1467.4
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 1467.4
Samples: 187

Max nTPM: 3250.8
Min nTPM: 677.9
Std nTPM: 476.2
Median nTPM: 1378.3
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 3250.8
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 2998.1
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 2752.3
GTEX-14PK6-1626-SM-6871I 70-79 years, female 2705.4
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 2655.0
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 2652.6
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 2517.4
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 2406.5
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 2387.0
GTEX-183FY-1626-SM-793D8 20-29 years, male 2330.6
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 2282.5
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 2237.2
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 2235.3
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 2216.5
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 2201.6
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 2176.4
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 2169.5
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 2131.2
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 2102.2
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 2078.7
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 2061.3
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 2057.3
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 2017.3
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 2005.7
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 2004.4
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 1977.9
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 1931.1
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 1919.9
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 1904.2
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 1894.4
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 1883.2
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 1879.6
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 1878.9
GTEX-13O61-1326-SM-5KM31 60-69 years, male 1875.1
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 1869.8
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 1865.9
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 1862.8
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 1858.1
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 1855.8
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 1840.9
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 1838.5
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 1792.6
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 1786.8
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 1770.2
GTEX-1C475-1426-SM-793CH 40-49 years, female 1754.0
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 1750.6
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 1744.1
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 1739.3
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 1735.6
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 1717.4
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 1715.3
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 1706.9
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 1698.3
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 1690.1
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 1688.2
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 1685.2
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 1676.3
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 1662.1
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 1658.1
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 1658.1
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 1648.7
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 1637.0
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 1636.2
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 1630.0
GTEX-14PKU-1626-SM-6871C 40-49 years, female 1629.7
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 1620.8
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 1620.0
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 1614.8
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 1612.5
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 1609.5
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 1606.1
GTEX-1192X-2526-SM-59868 50-59 years, male 1604.4
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 1600.1
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 1596.0
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 1594.4
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 1579.7
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 1579.6
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 1576.2
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 1533.1
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 1530.7
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 1486.1
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 1478.5
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 1476.1
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 1463.0
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 1445.5
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 1436.4
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 1436.0
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 1435.2
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 1421.1
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 1396.2
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 1395.4
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 1394.6
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 1392.1
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 1378.3
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 1358.4
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 1350.3
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 1349.5
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 1341.5
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 1341.0
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 1339.4
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 1337.3
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 1336.5
GTEX-13113-1226-SM-5EGHT 60-69 years, female 1311.1
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 1301.8
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 1275.7
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 1275.2
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 1263.1
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 1246.5
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 1242.0
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 1239.9
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 1233.8
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 1228.0
GTEX-117YX-0326-SM-5GICL 50-59 years, male 1219.8
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 1211.8
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 1206.5
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 1204.7
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 1204.3
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 1201.2
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 1200.0
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 1196.9
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 1194.6
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 1190.5
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 1187.5
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 1186.3
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 1183.5
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 1181.7
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 1177.3
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 1177.0
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 1175.9
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 1174.7
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 1168.9
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 1166.9
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 1161.3
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 1159.0
GTEX-13111-1426-SM-5DUW3 50-59 years, male 1135.6
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 1133.5
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 1132.5
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 1126.4
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 1111.5
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 1108.0
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 1107.8
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 1107.5
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 1105.7
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 1097.5
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 1080.8
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 1080.7
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 1075.8
GTEX-14PN3-2026-SM-68729 60-69 years, female 1071.4
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 1066.8
GTEX-144GM-1026-SM-79OKU 20-29 years, male 1048.6
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 1043.2
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 1038.7
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 1037.1
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 1033.2
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 1028.1
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 1017.9
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 1017.2
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 999.3
GTEX-1122O-1326-SM-5H11F 60-69 years, female 995.5
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 990.7
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 986.0
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 980.5
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 977.9
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 976.9
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 969.0
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 958.5
GTEX-111YS-1426-SM-5GID8 60-69 years, male 954.7
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 953.0
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 944.8
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 922.1
GTEX-YFCO-1326-SM-664NV 40-49 years, male 911.7
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 898.0
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 896.3
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 889.0
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 881.8
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 881.0
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 861.2
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 857.6
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 842.8
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 815.9
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 813.6
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 791.0
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 774.8
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 748.4
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 747.2
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 716.1
GTEX-ZTSS-0926-SM-59865 40-49 years, male 677.9
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SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 1710.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 1710.5
FF:10024-101D6 15,40,85 years, mixed 1710.5

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