HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:1175.0 nTPM
HPA:1175.0 nTPM
GTEx:1225.5 nTPM
FANTOM5:26.9 Scaled Tags Per Million
Pig:439.8 nTPM
Mouse:1001.9 nTPM
Allen mouse:24.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043014
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 1175.0
Sample id Sample description nTPM
Hippocampus
nTPM: 1175.0
2529 Female, age 94, left hemisphere 1226.4
2621 Female, age 67, right hemisphere 1186.2
1898 Male, age 80, left hemisphere 1183.8
1855 Male, age 76, left hemisphere 1159.3
1911 Female, age 85, right hemisphere 1148.7
2148 Female, age 91, left hemisphere 1145.8
Dentate gyrus
nTPM: 1166.7
2530 Female, age 94, left hemisphere 1251.6
2010 Male, age 76, both hemispheres 1179.5
2531 Female, age 67, both hemispheres 1164.7
2246 Female, age 85, both hemispheres 1155.6
2528 Male, age 74, both hemispheres 1126.0
1927 Female, age 91, both hemispheres 1123.1
Entorhinal gyrus
nTPM: 1167.9
2686 Male, age 75, right hemisphere 1204.3
2117 Female, age 91, right hemisphere 1190.8
1787 Male, age 76, left hemisphere 1179.2
2764 Male, age 80, right hemisphere 1159.0
1938 Female, age 85, left hemisphere 1147.7
2613 Female, age 94, left hemisphere 1126.5
Hippocampus, CA1
nTPM: 1152.5
2045 Male, age 76, both hemispheres 1159.2
2082 Female, age 91, right hemisphere 1156.8
2749 Male, age 80, left hemisphere 1155.8
2527 Male, age 74, both hemispheres 1152.0
1873 Female, age 85, both hemispheres 1138.7
Hippocampus, CA2
nTPM: 1155.7
1963 Male, age 80, left hemisphere 1176.8
2437 Female, age 94, left hemisphere 1165.9
2113 Female, age 91, right hemisphere 1156.3
1892 Male, age 76, both hemispheres 1154.6
1940 Female, age 85, left hemisphere 1145.2
2249 Male, age 74, both hemispheres 1135.5
Hippocampus, CA3
nTPM: 1137.8
1891 Female, age 85, both hemispheres 1159.9
1867 Male, age 76, both hemispheres 1158.6
2861 Female, age 67, both hemispheres 1151.0
2137 Male, age 80, left hemisphere 1136.7
2436 Male, age 74, both hemispheres 1127.9
2620 Female, age 94, left hemisphere 1092.7
Parahippocampal cortex
nTPM: 1144.1
2018 Male, age 76, both hemispheres 1178.8
2532 Female, age 72, left hemisphere 1170.5
2245 Female, age 91, both hemispheres 1168.9
2692 Male, age 74, both hemispheres 1150.2
2250 Female, age 67, right hemisphere 1148.8
1850 Male, age 80, both hemispheres 1148.3
1933 Female, age 85, both hemispheres 1136.6
1990 Female, age 91, right hemisphere 1133.1
2622 Female, age 67, right hemisphere 1116.6
2693 Female, age 94, both hemispheres 1089.4
Perirhinal gyrus
nTPM: 1138.1
1794 Male, age 80, right hemisphere 1148.8
1847 Female, age 91, left hemisphere 1141.7
1841 Female, age 85, right hemisphere 1140.4
2521 Female, age 94, right hemisphere 1131.3
2848 Male, age 76, right hemisphere 1128.4
Subiculum
nTPM: 1167.9
2042 Male, age 76, both hemispheres 1198.2
1977 Female, age 85, both hemispheres 1177.4
2438 Female, age 94, left hemisphere 1172.8
1901 Male, age 80, both hemispheres 1172.7
2619 Male, age 74, both hemispheres 1152.7
2729 Female, age 91, right hemisphere 1133.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 1225.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1225.5
Samples: 197

Max nTPM: 2951.7
Min nTPM: 590.5
Std nTPM: 408.2
Median nTPM: 1107.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 2951.7
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 2821.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 2571.1
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 2447.4
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 2400.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 2318.8
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 2237.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 2149.7
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 2133.4
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 2057.6
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 1922.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 26.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.9
FF:10169-103B7 60 years, female 32.4
FF:10153-102I9 76 years, female 21.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 439.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 439.8
Samples: 4

Max nTPM: 567.6
Min nTPM: 334.8
Sample A Female 567.6
Sample B Female 352.1
Sample C Male 504.7
Sample D Male 334.8
Entorhinal cortex
nTPM: 337.4
Samples: 4

Max nTPM: 389.0
Min nTPM: 285.7
Sample A Female 323.9
Sample B Female 350.8
Sample C Male 389.0
Sample D Male 285.7
Subiculum
nTPM: 351.6
Samples: 4

Max nTPM: 484.5
Min nTPM: 302.5
Sample A Female 484.5
Sample B Female 314.8
Sample C Male 304.7
Sample D Male 302.5
Ventral hippocampus
nTPM: 379.6
Samples: 4

Max nTPM: 460.5
Min nTPM: 286.7
Sample A Female 361.4
Sample B Female 286.7
Sample C Male 460.5
Sample D Male 409.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1001.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 976.6
Samples: 4

Max nTPM: 1036.6
Min nTPM: 932.6
Sample A Male 948.1
Sample B Male 988.9
Sample C Female 1036.6
Sample D Female 932.6
Hippocampal formation
nTPM: 1001.9
Samples: 4

Max nTPM: 1155.2
Min nTPM: 914.3
Sample A Male 1155.2
Sample B Male 914.3
Sample C Female 942.7
Sample D Female 995.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 24.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 24.8
100143495 Antisense, RP_110407_01_F05, Mouse strain C57BL/6J (56 days, male) 24.8

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