AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		51.929
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:149.2 nTPM
HPA:149.2 nTPM
GTEx:226.0 nTPM
FANTOM5:122.5 Scaled Tags Per Million
Pig:123.3 nTPM
Mouse:282.1 nTPM
Allen mouse:9.1 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA023548
Amygdala mean intensity 51.929
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract -
Basal medial amygdaloid nucleus 39.666
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 34.714
Cortical amygdala 34.620
Central amygdala 51.929
Medial amygdaloid nucleus 46.356

AMYGDALA - HPA Brain RNA-seq
Max nTPM 149.2
Sample id Sample description nTPM
Amygdala
nTPM: 99.3
2517 Female, age 94, left hemisphere 119.8
2814 Male, age 76, right hemisphere 110.2
1987 Female, age 91, left hemisphere 103.0
2514 Male, age 75, right hemisphere 92.0
2695 Female, age 67, right hemisphere 71.7
Basal amygdala
nTPM: 149.2
2243 Female, age 91, right hemisphere 187.8
2685 Female, age 94, left hemisphere 165.2
2110 Male, age 80, left hemisphere 150.8
2827 Female, age 67, right hemisphere 143.1
2609 Male, age 75, right hemisphere 128.4
1955 Male, age 76, both hemispheres 119.7
Central amygdala
nTPM: 116.9
2826 Female, age 94, left hemisphere 168.1
2239 Male, age 80, left hemisphere 134.6
1905 Male, age 76, both hemispheres 102.4
2515 Male, age 75, right hemisphere 91.6
2701 Female, age 91, right hemisphere 87.8
Corticomedial amygdala
nTPM: 144.1
2242 Female, age 91, right hemisphere 171.0
2829 Male, age 80, left hemisphere 162.7
2535 Female, age 67, right hemisphere 156.9
2429 Female, age 94, left hemisphere 134.9
2428 Male, age 75, right hemisphere 126.5
2240 Male, age 76, both hemispheres 112.5
Lateral amygdala
nTPM: 128.3
2534 Female, age 94, left hemisphere 204.3
2256 Male, age 80, left hemisphere 144.3
1883 Male, age 76, both hemispheres 114.4
2255 Female, age 91, right hemisphere 111.1
2830 Female, age 67, right hemisphere 99.5
2516 Male, age 75, right hemisphere 96.0
Stria terminalis, bed nucleus
nTPM: 130.9
1974 Female, age 91, both hemispheres 157.9
2486 Female, age 94, both hemispheres 142.7
2201 Male, age 74, unknown 92.2

AMYGDALA - GTEx RNA-seqi
Average nTPM 226.0
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 226.0
Samples: 152

Max nTPM: 679.5
Min nTPM: 10.1
Std nTPM: 115.7
Median nTPM: 210.9
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 679.5
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 675.1
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 487.3
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 478.5
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 475.1
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 474.0
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 459.1
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 429.7
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 427.9
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 420.9
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 408.7
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 122.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 122.5
FF:10151-102I7 76 years, female 122.5

AMYGDALA - Pig RNA-seqi
Average nTPM 123.3
Pig sample Sample description nTPM
Amygdala
nTPM: 123.2
Samples: 4

Max nTPM: 161.7
Min nTPM: 93.8
Sample A Female 161.7
Sample B Female 101.5
Sample C Male 135.9
Sample D Male 93.8

AMYGDALA - Mouse RNA-seqi
Average nTPM 282.1
Mouse sample Sample description nTPM
Amygdala
nTPM: 282.1
Samples: 4

Max nTPM: 318.1
Min nTPM: 259.0
Sample A Male 263.4
Sample B Male 287.8
Sample C Female 318.1
Sample D Female 259.0

AMYGDALA - Allen Mouse ISHi
Max Expression energy 9.1
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 9.1
68745366 Antisense, RP_050210_01_G09, Mouse strain C57BL/6J (56 days, male) 9.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.