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RUNDC3A
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  • RUNDC3A
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:147.5 nTPM
FANTOM5:97.5 Scaled Tags Per Million
Pig:119.9 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA023548Antibody HPA070733
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 147.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 147.5
Samples: 246

Max nTPM: 397.2
Min nTPM: 32.3
Std nTPM: 59.7
Median nTPM: 148.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 397.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 317.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 313.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 305.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 270.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 264.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 259.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 256.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 251.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 251.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 247.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 245.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 244.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 244.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 242.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 241.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 231.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 231.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 230.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 230.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 229.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 227.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 223.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 221.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 221.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 220.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 218.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 216.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 216.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 216.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 216.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 215.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 215.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 215.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 214.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 213.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 209.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 209.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 209.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 207.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 205.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 204.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 203.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 203.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 202.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 201.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 198.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 195.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 195.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 193.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 193.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 193.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 193.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 190.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 190.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 189.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 189.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 186.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 185.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 185.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 185.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 184.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 183.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 183.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 183.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 182.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 181.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 180.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 179.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 178.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 178.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 177.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 176.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 175.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 175.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 174.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 174.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 174.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 173.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 172.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 170.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 169.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 169.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 168.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 167.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 167.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 167.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 167.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 167.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 166.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 166.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 165.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 165.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 165.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 165.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 164.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 163.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 163.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 163.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 163.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 163.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 163.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 162.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 162.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 161.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 161.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 160.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 160.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 159.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 159.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 156.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 155.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 155.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 154.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 154.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 154.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 152.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 151.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 151.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 150.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 149.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 148.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 148.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 148.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 148.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 147.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 147.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 144.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 143.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 143.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 142.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 141.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 141.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 141.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 140.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 139.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 139.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 139.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 138.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 138.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 136.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 136.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 136.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 136.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 136.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 135.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 135.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 134.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 132.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 132.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 131.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 130.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 129.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 129.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 128.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 127.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 127.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 127.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 126.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 125.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 123.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 120.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 120.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 118.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 117.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 117.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 116.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 114.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 114.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 114.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 114.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 113.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 113.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 111.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 110.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 108.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 107.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 107.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 106.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 106.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 106.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 105.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 103.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 103.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 103.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 103.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 102.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 98.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 97.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 94.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 94.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 94.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 94.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 93.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 90.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 90.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 90.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 89.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 89.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 89.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 87.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 86.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 85.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 85.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 82.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 80.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 78.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 77.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 77.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 77.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 76.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 76.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 74.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 74.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 73.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 73.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 72.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 72.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 71.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 71.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 69.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 69.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 69.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 68.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 67.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 66.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 63.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 62.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 62.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 61.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 61.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 57.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 57.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 56.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 56.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 52.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 52.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 50.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 49.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 46.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 46.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 44.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 42.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 36.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 32.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 32.3
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 97.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 97.5
FF:10164-103B2 76 years, female 97.5

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 119.9
Pig sample Sample description nTPM
Caudate
nTPM: 119.9
Samples: 4

Max nTPM: 148.0
Min nTPM: 93.2
Sample A Female 93.2
Sample B Female 128.3
Sample C Male 148.0
Sample D Male 110.2

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