HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:19.1 nTPM
HPA:19.1 nTPM
GTEx:15.2 nTPM
FANTOM5:31.2 Scaled Tags Per Million
Pig:24.6 nTPM
Mouse:39.8 nTPM
Allen mouse:11.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.1
Sample id Sample description nTPM
Hippocampus
nTPM: 15.0
1898 Male, age 80, left hemisphere 24.2
2148 Female, age 91, left hemisphere 15.9
2621 Female, age 67, right hemisphere 15.1
1911 Female, age 85, right hemisphere 12.4
1855 Male, age 76, left hemisphere 11.5
2529 Female, age 94, left hemisphere 10.9
Dentate gyrus
nTPM: 16.5
1927 Female, age 91, both hemispheres 22.1
2530 Female, age 94, left hemisphere 18.2
2010 Male, age 76, both hemispheres 16.0
2531 Female, age 67, both hemispheres 15.8
2528 Male, age 74, both hemispheres 14.1
2246 Female, age 85, both hemispheres 13.1
Entorhinal gyrus
nTPM: 16.0
2764 Male, age 80, right hemisphere 21.9
1938 Female, age 85, left hemisphere 18.0
2613 Female, age 94, left hemisphere 16.9
1787 Male, age 76, left hemisphere 14.0
2686 Male, age 75, right hemisphere 13.5
2117 Female, age 91, right hemisphere 11.6
Hippocampus, CA1
nTPM: 19.1
2749 Male, age 80, left hemisphere 34.5
1873 Female, age 85, both hemispheres 17.9
2527 Male, age 74, both hemispheres 17.7
2082 Female, age 91, right hemisphere 12.9
2045 Male, age 76, both hemispheres 12.3
Hippocampus, CA2
nTPM: 16.6
1963 Male, age 80, left hemisphere 21.4
1892 Male, age 76, both hemispheres 17.9
2437 Female, age 94, left hemisphere 16.2
2249 Male, age 74, both hemispheres 15.7
2113 Female, age 91, right hemisphere 14.4
1940 Female, age 85, left hemisphere 13.9
Hippocampus, CA3
nTPM: 15.8
2620 Female, age 94, left hemisphere 17.4
1867 Male, age 76, both hemispheres 17.3
2436 Male, age 74, both hemispheres 17.2
2137 Male, age 80, left hemisphere 16.3
1891 Female, age 85, both hemispheres 14.6
2861 Female, age 67, both hemispheres 12.0
Parahippocampal cortex
nTPM: 15.3
1990 Female, age 91, right hemisphere 20.2
1850 Male, age 80, both hemispheres 16.8
2692 Male, age 74, both hemispheres 16.6
2245 Female, age 91, both hemispheres 16.4
1933 Female, age 85, both hemispheres 15.5
2532 Female, age 72, left hemisphere 15.3
2693 Female, age 94, both hemispheres 14.6
2018 Male, age 76, both hemispheres 12.7
2250 Female, age 67, right hemisphere 12.3
2622 Female, age 67, right hemisphere 12.3
Perirhinal gyrus
nTPM: 17.4
1847 Female, age 91, left hemisphere 22.6
1794 Male, age 80, right hemisphere 19.8
2521 Female, age 94, right hemisphere 18.7
1841 Female, age 85, right hemisphere 13.1
2848 Male, age 76, right hemisphere 12.6
Subiculum
nTPM: 15.2
1901 Male, age 80, both hemispheres 18.1
1977 Female, age 85, both hemispheres 17.6
2619 Male, age 74, both hemispheres 16.7
2042 Male, age 76, both hemispheres 15.0
2729 Female, age 91, right hemisphere 13.0
2438 Female, age 94, left hemisphere 10.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.2
Samples: 197

Max nTPM: 26.2
Min nTPM: 7.4
Std nTPM: 3.5
Median nTPM: 14.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 26.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 23.9
GTEX-1H3NZ-0011-R1a-SM-CKZP5 60-69 years, male 23.9
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 23.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 23.0
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 22.6
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 22.3
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 21.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 21.9
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 21.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 21.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 31.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 31.2
FF:10153-102I9 76 years, female 36.4
FF:10169-103B7 60 years, female 26.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 24.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 22.6
Samples: 4

Max nTPM: 26.7
Min nTPM: 16.9
Sample A Female 26.7
Sample B Female 25.9
Sample C Male 20.7
Sample D Male 16.9
Entorhinal cortex
nTPM: 21.0
Samples: 4

Max nTPM: 23.0
Min nTPM: 19.1
Sample A Female 20.5
Sample B Female 21.5
Sample C Male 23.0
Sample D Male 19.1
Subiculum
nTPM: 22.6
Samples: 4

Max nTPM: 26.7
Min nTPM: 19.6
Sample A Female 26.7
Sample B Female 20.9
Sample C Male 23.0
Sample D Male 19.6
Ventral hippocampus
nTPM: 24.6
Samples: 4

Max nTPM: 31.8
Min nTPM: 17.4
Sample A Female 27.8
Sample B Female 17.4
Sample C Male 31.8
Sample D Male 21.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 39.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 39.8
Samples: 4

Max nTPM: 47.8
Min nTPM: 36.1
Sample A Male 36.5
Sample B Male 38.9
Sample C Female 36.1
Sample D Female 47.8
Hippocampal formation
nTPM: 36.0
Samples: 4

Max nTPM: 38.8
Min nTPM: 32.6
Sample A Male 32.6
Sample B Male 38.8
Sample C Female 37.1
Sample D Female 35.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.1
68862084 Antisense, RP_050301_01_E05, Mouse strain C57BL/6J (56 days, male) 11.1

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