COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:13.4 nTPM
HPA:6.2 nTPM
GTEx:13.4 nTPM
FANTOM5:7.5 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 6.2
overview
Male, age 54 		Colon sample 67
nTPM: 4.2
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 4.8
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 2.9
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 6.8
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 5.2
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 4.6
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 6.5
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 7.1
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 5.6
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 7
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 7.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 8.1
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 11.1
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 13.4
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 13.4
Samples: 373

Max nTPM: 103.4
Min nTPM: 0.0
Std nTPM: 17.5
Median nTPM: 6.1
GTEX-139UW-2326-SM-5KM1Y 60-69 years, male 103.4
GTEX-1BAJH-2726-SM-7IGNJ 70-79 years, male 100.9
GTEX-11DXZ-1626-SM-5GIDI 50-59 years, male 96.0
GTEX-13QBU-2026-SM-5KLZB 40-49 years, female 86.2
GTEX-1R9JW-2126-SM-E76QT 30-39 years, female 85.5
GTEX-YF7O-1626-SM-5IFII 50-59 years, male 71.6
GTEX-145LT-0826-SM-5S2QL 40-49 years, male 70.1
GTEX-1H1ZS-2626-SM-9QEIX 70-79 years, male 65.7
GTEX-1LVAO-2826-SM-E9TJH 60-69 years, male 64.2
GTEX-1QPFJ-2426-SM-EVR3L 30-39 years, female 63.7
GTEX-13G51-2126-SM-5IJD9 60-69 years, male 60.8
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Colon - Transverse
Average nTPM: 5.8
Samples: 406

Max nTPM: 37.1
Min nTPM: 0.1
Std nTPM: 5.1
Median nTPM: 4.5
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 37.1
GTEX-14PJ5-0926-SM-6LLIK 60-69 years, female 36.5
GTEX-15CHQ-2526-SM-6EU24 60-69 years, male 29.3
GTEX-1LGOU-1626-SM-D3LAK 20-29 years, female 26.3
GTEX-1GMR3-2826-SM-9WPOG 40-49 years, male 24.4
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 23.4
GTEX-1I1GR-2526-SM-CNNQF 60-69 years, male 22.5
GTEX-ZAB4-2226-SM-5HL97 40-49 years, male 21.7
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 21.2
GTEX-1IOXB-2626-SM-CJI2N 50-59 years, male 20.2
GTEX-Y8LW-1226-SM-4WWDP 50-59 years, female 20.1
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 7.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 7.5
FF:10014-101C5 62,83,84 years, mixed 7.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.