HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:59.8 nTPM
HPA:59.8 nTPM
GTEx:64.6 nTPM
FANTOM5:140.0 Scaled Tags Per Million
Pig:32.6 nTPM
Mouse:9.3 nTPM
Allen mouse:1.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB012265
Glial cells High
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 59.8
Sample id Sample description nTPM
Hippocampus
nTPM: 59.7
2529 Female, age 94, left hemisphere 61.9
2621 Female, age 67, right hemisphere 60.6
1898 Male, age 80, left hemisphere 60.2
1911 Female, age 85, right hemisphere 59.7
2148 Female, age 91, left hemisphere 58.3
1855 Male, age 76, left hemisphere 57.6
Dentate gyrus
nTPM: 59.2
2530 Female, age 94, left hemisphere 60.5
2246 Female, age 85, both hemispheres 60.4
2528 Male, age 74, both hemispheres 59.2
2010 Male, age 76, both hemispheres 58.9
1927 Female, age 91, both hemispheres 58.2
2531 Female, age 67, both hemispheres 58.0
Entorhinal gyrus
nTPM: 58.5
2117 Female, age 91, right hemisphere 60.3
2764 Male, age 80, right hemisphere 59.4
1787 Male, age 76, left hemisphere 59.3
1938 Female, age 85, left hemisphere 59.0
2686 Male, age 75, right hemisphere 57.3
2613 Female, age 94, left hemisphere 55.9
Hippocampus, CA1
nTPM: 59.7
2749 Male, age 80, left hemisphere 63.0
2527 Male, age 74, both hemispheres 61.8
1873 Female, age 85, both hemispheres 60.3
2082 Female, age 91, right hemisphere 57.4
2045 Male, age 76, both hemispheres 56.1
Hippocampus, CA2
nTPM: 58.3
2249 Male, age 74, both hemispheres 61.1
1892 Male, age 76, both hemispheres 58.9
2113 Female, age 91, right hemisphere 57.9
2437 Female, age 94, left hemisphere 57.5
1963 Male, age 80, left hemisphere 57.4
1940 Female, age 85, left hemisphere 57.1
Hippocampus, CA3
nTPM: 58.4
2137 Male, age 80, left hemisphere 60.2
1891 Female, age 85, both hemispheres 60.0
2861 Female, age 67, both hemispheres 59.3
1867 Male, age 76, both hemispheres 58.4
2436 Male, age 74, both hemispheres 58.2
2620 Female, age 94, left hemisphere 54.1
Parahippocampal cortex
nTPM: 59.2
1850 Male, age 80, both hemispheres 60.4
2245 Female, age 91, both hemispheres 60.3
1933 Female, age 85, both hemispheres 59.9
2532 Female, age 72, left hemisphere 59.7
2018 Male, age 76, both hemispheres 59.5
2692 Male, age 74, both hemispheres 59.4
2622 Female, age 67, right hemisphere 58.9
2250 Female, age 67, right hemisphere 58.7
1990 Female, age 91, right hemisphere 58.6
2693 Female, age 94, both hemispheres 56.5
Perirhinal gyrus
nTPM: 59.5
1841 Female, age 85, right hemisphere 61.0
1794 Male, age 80, right hemisphere 60.3
2848 Male, age 76, right hemisphere 59.0
1847 Female, age 91, left hemisphere 58.5
2521 Female, age 94, right hemisphere 58.5
Subiculum
nTPM: 59.8
2438 Female, age 94, left hemisphere 62.9
1901 Male, age 80, both hemispheres 60.2
1977 Female, age 85, both hemispheres 60.1
2729 Female, age 91, right hemisphere 59.4
2042 Male, age 76, both hemispheres 58.9
2619 Male, age 74, both hemispheres 57.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 64.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 64.6
Samples: 197

Max nTPM: 92.9
Min nTPM: 34.1
Std nTPM: 9.6
Median nTPM: 64.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 92.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 92.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 92.4
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 90.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 85.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 85.5
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 83.9
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 83.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 81.9
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 80.8
GTEX-1HSKV-0011-R1b-SM-CMKH7 60-69 years, male 80.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 140.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 140.0
FF:10169-103B7 60 years, female 146.4
FF:10153-102I9 76 years, female 133.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 32.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 32.2
Samples: 4

Max nTPM: 35.4
Min nTPM: 30.1
Sample A Female 35.4
Sample B Female 30.1
Sample C Male 30.9
Sample D Male 32.4
Entorhinal cortex
nTPM: 32.7
Samples: 4

Max nTPM: 36.4
Min nTPM: 28.9
Sample A Female 28.9
Sample B Female 36.4
Sample C Male 33.8
Sample D Male 31.5
Subiculum
nTPM: 31.7
Samples: 4

Max nTPM: 38.2
Min nTPM: 28.3
Sample A Female 38.2
Sample B Female 31.3
Sample C Male 28.3
Sample D Male 28.8
Ventral hippocampus
nTPM: 30.6
Samples: 4

Max nTPM: 31.7
Min nTPM: 29.4
Sample A Female 30.0
Sample B Female 29.4
Sample C Male 31.7
Sample D Male 31.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 9.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.3
Samples: 4

Max nTPM: 11.0
Min nTPM: 7.3
Sample A Male 9.2
Sample B Male 9.5
Sample C Female 11.0
Sample D Female 7.3
Hippocampal formation
nTPM: 8.9
Samples: 4

Max nTPM: 11.2
Min nTPM: 7.7
Sample A Male 11.2
Sample B Male 8.5
Sample C Female 7.7
Sample D Female 8.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.1
70813209 Antisense, RP_050712_03_D07, Mouse strain C57BL/6J (56 days, male) 1.8
77454690 Antisense, RP_070129_01_C10, Mouse strain C57BL/6J (56 days, male) 0.4

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The Human Protein Atlas

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