HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:38.2 nTPM
HPA:38.2 nTPM
GTEx:31.2 nTPM
FANTOM5:23.5 Scaled Tags Per Million
Mouse:6.0 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 38.2
Sample id Sample description nTPM
Hippocampus
nTPM: 38.2
2529 Female, age 94, left hemisphere 39.7
2621 Female, age 67, right hemisphere 39.0
1898 Male, age 80, left hemisphere 38.3
1911 Female, age 85, right hemisphere 37.9
2148 Female, age 91, left hemisphere 37.3
1855 Male, age 76, left hemisphere 36.8
Dentate gyrus
nTPM: 37.9
2530 Female, age 94, left hemisphere 42.1
2531 Female, age 67, both hemispheres 38.6
2528 Male, age 74, both hemispheres 37.9
1927 Female, age 91, both hemispheres 36.4
2246 Female, age 85, both hemispheres 36.3
2010 Male, age 76, both hemispheres 35.9
Entorhinal gyrus
nTPM: 36.4
1787 Male, age 76, left hemisphere 37.6
2686 Male, age 75, right hemisphere 37.4
2117 Female, age 91, right hemisphere 36.9
2764 Male, age 80, right hemisphere 36.1
1938 Female, age 85, left hemisphere 35.7
2613 Female, age 94, left hemisphere 34.7
Hippocampus, CA1
nTPM: 36.4
2527 Male, age 74, both hemispheres 38.3
2082 Female, age 91, right hemisphere 36.3
2045 Male, age 76, both hemispheres 36.1
2749 Male, age 80, left hemisphere 35.9
1873 Female, age 85, both hemispheres 35.3
Hippocampus, CA2
nTPM: 37.7
2437 Female, age 94, left hemisphere 41.2
1963 Male, age 80, left hemisphere 38.0
2249 Male, age 74, both hemispheres 37.6
2113 Female, age 91, right hemisphere 36.8
1892 Male, age 76, both hemispheres 36.6
1940 Female, age 85, left hemisphere 35.8
Hippocampus, CA3
nTPM: 37.7
2861 Female, age 67, both hemispheres 40.5
1867 Male, age 76, both hemispheres 38.1
1891 Female, age 85, both hemispheres 37.5
2436 Male, age 74, both hemispheres 36.8
2620 Female, age 94, left hemisphere 36.8
2137 Male, age 80, left hemisphere 36.2
Parahippocampal cortex
nTPM: 36.4
2018 Male, age 76, both hemispheres 38.2
1990 Female, age 91, right hemisphere 37.1
2245 Female, age 91, both hemispheres 37.1
2250 Female, age 67, right hemisphere 37.0
2692 Male, age 74, both hemispheres 36.4
1850 Male, age 80, both hemispheres 36.2
1933 Female, age 85, both hemispheres 36.1
2532 Female, age 72, left hemisphere 35.8
2622 Female, age 67, right hemisphere 35.7
2693 Female, age 94, both hemispheres 34.8
Perirhinal gyrus
nTPM: 36.2
1841 Female, age 85, right hemisphere 37.1
1847 Female, age 91, left hemisphere 36.3
2521 Female, age 94, right hemisphere 36.0
2848 Male, age 76, right hemisphere 35.9
1794 Male, age 80, right hemisphere 35.8
Subiculum
nTPM: 37.2
2042 Male, age 76, both hemispheres 38.9
2619 Male, age 74, both hemispheres 38.2
2729 Female, age 91, right hemisphere 37.3
2438 Female, age 94, left hemisphere 36.7
1901 Male, age 80, both hemispheres 36.5
1977 Female, age 85, both hemispheres 35.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 31.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 31.2
Samples: 197

Max nTPM: 140.0
Min nTPM: 4.2
Std nTPM: 20.7
Median nTPM: 26.1
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 140.0
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 104.2
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 99.2
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 93.1
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 91.8
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 90.8
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 85.3
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 79.9
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 79.9
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 78.7
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 75.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 23.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 23.5
FF:10169-103B7 60 years, female 26.1
FF:10153-102I9 76 years, female 20.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 6.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 6.0
Samples: 4

Max nTPM: 7.6
Min nTPM: 4.6
Sample A Male 7.6
Sample B Male 4.6
Sample C Female 5.3
Sample D Female 6.4
Hippocampal formation
nTPM: 4.3
Samples: 4

Max nTPM: 5.0
Min nTPM: 2.9
Sample A Male 4.8
Sample B Male 2.9
Sample C Female 5.0
Sample D Female 4.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
68162269 Antisense, RP_041122_02_G03, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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