HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:51.5 nTPM
HPA:51.5 nTPM
GTEx:62.4 nTPM
FANTOM5:39.4 Scaled Tags Per Million
Pig:43.6 nTPM
Mouse:13.9 nTPM
Allen mouse:2.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA014742
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 51.5
Sample id Sample description nTPM
Hippocampus
nTPM: 47.1
1855 Male, age 76, left hemisphere 49.7
2621 Female, age 67, right hemisphere 49.0
1911 Female, age 85, right hemisphere 47.6
1898 Male, age 80, left hemisphere 47.5
2529 Female, age 94, left hemisphere 47.2
2148 Female, age 91, left hemisphere 41.6
Dentate gyrus
nTPM: 46.8
2530 Female, age 94, left hemisphere 54.9
2528 Male, age 74, both hemispheres 49.9
2010 Male, age 76, both hemispheres 49.7
2246 Female, age 85, both hemispheres 43.1
2531 Female, age 67, both hemispheres 42.8
1927 Female, age 91, both hemispheres 40.2
Entorhinal gyrus
nTPM: 46.9
2117 Female, age 91, right hemisphere 56.0
2764 Male, age 80, right hemisphere 50.3
1787 Male, age 76, left hemisphere 47.8
2613 Female, age 94, left hemisphere 43.9
1938 Female, age 85, left hemisphere 43.4
2686 Male, age 75, right hemisphere 40.0
Hippocampus, CA1
nTPM: 43.4
2527 Male, age 74, both hemispheres 46.0
1873 Female, age 85, both hemispheres 44.1
2082 Female, age 91, right hemisphere 43.5
2045 Male, age 76, both hemispheres 42.1
2749 Male, age 80, left hemisphere 41.3
Hippocampus, CA2
nTPM: 48.2
2249 Male, age 74, both hemispheres 52.0
1963 Male, age 80, left hemisphere 51.8
2437 Female, age 94, left hemisphere 49.3
1940 Female, age 85, left hemisphere 47.5
2113 Female, age 91, right hemisphere 45.0
1892 Male, age 76, both hemispheres 43.3
Hippocampus, CA3
nTPM: 44.2
1891 Female, age 85, both hemispheres 50.7
1867 Male, age 76, both hemispheres 48.6
2436 Male, age 74, both hemispheres 46.6
2861 Female, age 67, both hemispheres 41.2
2137 Male, age 80, left hemisphere 39.8
2620 Female, age 94, left hemisphere 38.3
Parahippocampal cortex
nTPM: 43.5
2018 Male, age 76, both hemispheres 50.7
2532 Female, age 72, left hemisphere 47.6
2692 Male, age 74, both hemispheres 45.5
1990 Female, age 91, right hemisphere 45.1
2245 Female, age 91, both hemispheres 43.0
1850 Male, age 80, both hemispheres 42.4
2250 Female, age 67, right hemisphere 42.2
1933 Female, age 85, both hemispheres 41.0
2693 Female, age 94, both hemispheres 40.9
2622 Female, age 67, right hemisphere 36.7
Perirhinal gyrus
nTPM: 41.0
2521 Female, age 94, right hemisphere 43.7
1794 Male, age 80, right hemisphere 41.8
2848 Male, age 76, right hemisphere 41.6
1841 Female, age 85, right hemisphere 39.5
1847 Female, age 91, left hemisphere 38.5
Subiculum
nTPM: 51.5
2042 Male, age 76, both hemispheres 63.3
1901 Male, age 80, both hemispheres 54.1
1977 Female, age 85, both hemispheres 49.7
2619 Male, age 74, both hemispheres 48.2
2729 Female, age 91, right hemisphere 47.6
2438 Female, age 94, left hemisphere 46.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 62.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 62.4
Samples: 197

Max nTPM: 198.5
Min nTPM: 14.6
Std nTPM: 30.1
Median nTPM: 56.5
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 198.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 162.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 156.0
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 143.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 136.5
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 133.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 131.1
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 127.0
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 119.7
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 118.4
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 118.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 39.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 39.4
FF:10153-102I9 76 years, female 44.2
FF:10169-103B7 60 years, female 34.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 43.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 43.6
Samples: 4

Max nTPM: 66.3
Min nTPM: 22.1
Sample A Female 66.3
Sample B Female 29.9
Sample C Male 56.0
Sample D Male 22.1
Entorhinal cortex
nTPM: 20.7
Samples: 4

Max nTPM: 22.8
Min nTPM: 19.0
Sample A Female 22.8
Sample B Female 20.8
Sample C Male 20.2
Sample D Male 19.0
Subiculum
nTPM: 26.8
Samples: 4

Max nTPM: 35.6
Min nTPM: 22.2
Sample A Female 35.6
Sample B Female 25.5
Sample C Male 22.2
Sample D Male 23.9
Ventral hippocampus
nTPM: 35.3
Samples: 4

Max nTPM: 43.5
Min nTPM: 19.5
Sample A Female 40.1
Sample B Female 19.5
Sample C Male 37.9
Sample D Male 43.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 13.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.1
Samples: 4

Max nTPM: 11.8
Min nTPM: 8.6
Sample A Male 10.1
Sample B Male 8.6
Sample C Female 11.8
Sample D Female 9.9
Hippocampal formation
nTPM: 14.0
Samples: 4

Max nTPM: 17.4
Min nTPM: 10.3
Sample A Male 10.3
Sample B Male 10.9
Sample C Female 17.2
Sample D Female 17.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.9
72731 Antisense, RP_040407_01_B03, Mouse strain C57BL/6J (56 days, male) 2.9

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