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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA015783
Pigment epithelial cells
Not detected
Photoreceptor cells
High
Limiting membrane
Not detected
Outer plexiform layer
Not detected
Inner nuclear layer
Medium
Inner plexiform layer
Not detected
Ganglion cells
Not detected
Nerve fiber layer
Not detected
RETINA - Extended tissue profilei
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody CAB022363
Pigment epithelial cells
Not detected
Photoreceptor cells
High
Limiting membrane
Not detected
Outer plexiform layer
Not detected
Inner nuclear layer
Medium
Inner plexiform layer
Not detected
Ganglion cells
Not detected
Nerve fiber layer
Not detected
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 999.3
Min nTPM: 110.5
Std nTPM: 198.1
Median nTPM:
354_1
81 years, female
999.3
218_1
71 years, female
927.5
319_1
81 years, male
910.5
172_1
72 years, female
894.4
350_1
84 years, female
816.5
243_1
75 years, male
802.5
447_1
81 years, male
796.5
352_1
62 years, male
787.8
237_1
82 years, male
780.9
386_1
76 years, male
760.9
6_1
73 years, female
760.6
163_1
78 years, male
759.8
353_1
82 years, female
745.0
349_1
83 years, male
719.3
376_1
75 years, female
672.9
375_1
74 years, female
669.7
379_1
60 years, male
664.2
347_1
72 years, male
662.4
321_1
62 years, female
656.2
355_1
70 years, female
654.6
356_1
87 years, female
628.5
286_1
68 years, female
628.1
384_1
83 years, male
622.4
335_1
73 years, female
601.3
425_1
59 years, female
599.5
177_1
74 years, male
595.5
320_1
89 years, female
593.3
322_1
76 years, male
590.6
316_1
62 years, male
586.5
389_1
86 years, female
583.3
292_1
71 years, male
582.9
351_1
91 years, male
582.3
318_1
68 years, male
578.3
348_1
84 years, male
568.8
377_1
82 years, female
554.1
394_1
75 years, female
526.6
293_1
68 years, female
522.0
480_1
63 years, male
521.6
189_1
76 years, male
512.9
405_1
91 years, male
510.8
404_1
82 years, female
505.6
35_1
74 years, female
493.4
115_1
83 years, male
488.6
406_1
79 years, male
474.8
452_1
88 years, female
471.9
173_1
67 years, male
464.2
251_1
78 years, male
450.9
99_1
64 years, male
447.3
153_1
70 years, female
447.2
307_1
66 years, female
445.4
503_1
68 years, male
442.0
264_1
73 years, female
434.8
265_1
87 years, male
433.2
311_1
78 years, male
432.3
317_1
60 years, male
427.9
229_1
69 years, female
426.4
291_1
76 years, male
422.4
526_1
61 years, male
418.6
396_1
62 years, male
416.3
117_1
61 years, male
407.8
266_1
85 years, male
406.2
9_1
66 years, female
404.3
518_1
75 years, female
399.9
506_1
65 years, male
396.2
2_1
77 years, female
390.7
517_1
88 years, male
384.5
145_1
84 years, male
384.0
246_1
77 years, male
382.9
254_1
77 years, female
368.0
126_1
63 years, male
354.4
18_1
88 years, male
349.4
468_1
89 years, male
340.1
324_1
76 years, male
338.5
295_1
61 years, female
337.0
4_1
88 years, female
332.5
217_1
76 years, male
328.2
142_1
61 years, female
317.8
499_1
55 years, female
314.7
313_1
79 years, female
313.4
17_1
71 years, male
310.5
137_1
83 years, male
306.2
42_1
85 years, male
301.9
315_1
62 years, female
292.4
43_1
64 years, female
290.8
120_1
70 years, female
285.5
41_1
94 years, female
281.5
32_1
67 years, male
265.5
109_1
81 years, female
256.7
495_1
57 years, female
252.0
415_1
77 years, female
251.2
288_1
66 years, female
247.4
414_1
84 years, female
244.8
119_1
70 years, female
241.8
162_1
79 years, female
232.9
139_1
64 years, female
230.8
314_1
67 years, male
229.7
81_1
67 years, male
225.5
308_1
70 years, female
222.4
490_1
67 years, female
199.0
466_1
57 years, female
193.4
149_1
88 years, male
138.1
89_1
63 years, male
127.0
491_1
89 years, female
123.2
501_1
88 years, male
115.5
413_1
59 years, female
110.5
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.