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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:163.1 nTPM
HPA:163.1 nTPM
GTEx:152.6 nTPM
FANTOM5:216.9 Scaled Tags Per Million

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 163.1
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 150.9
1981 Female, age 72, midline 165.8
2048 Male, age 55, midline 154.5
2565 Male, age 75, midline 149.9
2194 Female, age 79, both hemispheres 144.6
2816 Male, age 47, midline 139.6
Cervical spinal cord, dorsal horn
nTPM: 163.1
2296 Male, age 66, both hemispheres 175.3
2173 Female, age 72, unknown 174.4
2069 Male, age 47, both hemispheres 168.9
1877 Male, age 55, unknown 155.8
2297 Male, age 75, both hemispheres 155.6
2721 Male, age 90, both hemispheres 148.7
Cervical spinal cord, ventral horn
nTPM: 145.6
2098 Female, age 72, unknown 157.8
2068 Male, age 55, unknown 152.6
2480 Male, age 75, both hemispheres 143.9
2820 Female, age 79, both hemispheres 140.5
2295 Male, age 66, both hemispheres 139.7
2809 Male, age 90, both hemispheres 138.9

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 152.6
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 152.6
Samples: 159

Max nTPM: 242.4
Min nTPM: 95.2
Std nTPM: 29.9
Median nTPM: 150.9
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 242.4
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 230.2
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 219.3
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 218.0
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 215.8
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 208.9
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 205.6
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 205.4
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 204.3
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 203.8
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 197.7
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 197.2
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 195.0
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 194.7
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 193.8
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 193.2
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 190.6
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 187.0
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 187.0
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 187.0
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 186.7
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 186.2
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 185.9
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 185.1
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 185.0
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 184.5
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 183.4
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 183.3
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 182.3
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 181.1
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 180.9
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 180.7
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 179.6
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 179.5
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 178.6
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 178.5
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 175.6
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 174.5
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 174.3
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 173.6
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 173.5
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 173.1
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 172.9
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 172.7
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 171.8
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 171.1
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 171.0
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 170.7
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 170.7
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 170.3
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 169.7
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 169.4
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 168.0
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 167.0
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 164.8
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 164.5
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 163.0
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 160.7
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 160.2
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 159.6
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 159.5
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 159.4
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 159.1
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 158.9
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 158.9
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 158.9
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 158.2
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 156.7
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 155.8
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 155.7
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 155.3
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 155.0
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 154.3
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 153.5
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 153.4
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 152.7
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 152.5
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 152.4
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 151.4
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 150.9
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 150.1
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 149.4
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 149.0
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 148.3
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 147.6
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 147.4
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 146.8
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 146.7
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 146.2
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 145.3
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 144.7
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 144.6
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 144.4
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 143.6
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 143.1
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 143.0
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 143.0
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 142.2
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 142.2
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 141.1
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 139.9
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 139.6
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 138.2
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 137.2
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 134.8
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 134.1
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 133.8
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 133.6
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 133.0
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 132.3
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 132.3
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 130.9
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 130.4
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 129.4
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 129.4
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 129.3
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 129.3
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 128.8
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 128.6
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 127.9
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 127.2
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 126.6
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 125.9
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 125.8
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 125.2
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 124.8
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 124.1
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 123.6
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 123.4
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 123.0
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 122.8
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 122.3
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 122.2
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 121.6
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 121.1
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 120.3
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 120.1
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 118.9
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 117.8
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 117.3
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 117.2
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 115.5
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 115.2
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 115.1
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 114.4
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 113.9
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 113.7
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 113.1
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 111.5
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 111.3
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 111.3
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 109.9
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 109.0
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 107.9
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 105.8
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 103.0
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 99.1
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 95.4
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 95.2
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 216.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 216.9
FF:10181-103D1 60 years, female 266.7
FF:10159-103A6 76 years, female 167.0

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