HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:92.1 nTPM
HPA:92.1 nTPM
GTEx:85.9 nTPM
FANTOM5:280.9 Scaled Tags Per Million
Pig:9.2 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003920
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 92.1
Sample id Sample description nTPM
Hippocampus
nTPM: 87.7
1898 Male, age 80, left hemisphere 97.0
1855 Male, age 76, left hemisphere 94.5
2621 Female, age 67, right hemisphere 88.1
2529 Female, age 94, left hemisphere 85.6
1911 Female, age 85, right hemisphere 80.8
2148 Female, age 91, left hemisphere 80.0
Dentate gyrus
nTPM: 84.7
2010 Male, age 76, both hemispheres 95.0
2246 Female, age 85, both hemispheres 92.0
1927 Female, age 91, both hemispheres 85.4
2530 Female, age 94, left hemisphere 81.4
2528 Male, age 74, both hemispheres 80.5
2531 Female, age 67, both hemispheres 74.0
Entorhinal gyrus
nTPM: 81.2
1938 Female, age 85, left hemisphere 92.2
1787 Male, age 76, left hemisphere 85.3
2117 Female, age 91, right hemisphere 83.4
2764 Male, age 80, right hemisphere 82.6
2686 Male, age 75, right hemisphere 72.0
2613 Female, age 94, left hemisphere 71.9
Hippocampus, CA1
nTPM: 89.7
2749 Male, age 80, left hemisphere 102.6
2045 Male, age 76, both hemispheres 93.2
1873 Female, age 85, both hemispheres 88.8
2527 Male, age 74, both hemispheres 84.2
2082 Female, age 91, right hemisphere 79.6
Hippocampus, CA2
nTPM: 85.8
2249 Male, age 74, both hemispheres 97.7
1892 Male, age 76, both hemispheres 94.5
1963 Male, age 80, left hemisphere 84.0
1940 Female, age 85, left hemisphere 83.3
2113 Female, age 91, right hemisphere 77.9
2437 Female, age 94, left hemisphere 77.5
Hippocampus, CA3
nTPM: 87.2
2137 Male, age 80, left hemisphere 102.9
1867 Male, age 76, both hemispheres 95.3
2436 Male, age 74, both hemispheres 88.3
1891 Female, age 85, both hemispheres 85.0
2620 Female, age 94, left hemisphere 82.0
2861 Female, age 67, both hemispheres 69.5
Parahippocampal cortex
nTPM: 87.0
1850 Male, age 80, both hemispheres 95.2
2018 Male, age 76, both hemispheres 91.8
2250 Female, age 67, right hemisphere 91.5
2532 Female, age 72, left hemisphere 91.2
2245 Female, age 91, both hemispheres 90.5
2693 Female, age 94, both hemispheres 88.1
1990 Female, age 91, right hemisphere 87.2
1933 Female, age 85, both hemispheres 83.3
2692 Male, age 74, both hemispheres 79.7
2622 Female, age 67, right hemisphere 71.5
Perirhinal gyrus
nTPM: 92.1
1841 Female, age 85, right hemisphere 97.6
1847 Female, age 91, left hemisphere 95.2
2848 Male, age 76, right hemisphere 90.2
2521 Female, age 94, right hemisphere 89.2
1794 Male, age 80, right hemisphere 88.2
Subiculum
nTPM: 84.5
2438 Female, age 94, left hemisphere 93.2
2042 Male, age 76, both hemispheres 89.3
1901 Male, age 80, both hemispheres 86.6
1977 Female, age 85, both hemispheres 82.2
2729 Female, age 91, right hemisphere 78.4
2619 Male, age 74, both hemispheres 77.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 85.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 85.9
Samples: 197

Max nTPM: 169.6
Min nTPM: 60.0
Std nTPM: 16.7
Median nTPM: 82.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 169.6
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 156.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 148.9
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 138.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 138.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 134.6
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 129.0
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 119.3
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 114.4
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 114.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 113.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 280.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 280.9
FF:10169-103B7 60 years, female 292.9
FF:10153-102I9 76 years, female 268.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 8.9
Samples: 4

Max nTPM: 13.5
Min nTPM: 4.8
Sample A Female 4.8
Sample B Female 9.6
Sample C Male 7.5
Sample D Male 13.5
Entorhinal cortex
nTPM: 9.2
Samples: 4

Max nTPM: 13.0
Min nTPM: 6.3
Sample A Female 6.3
Sample B Female 10.1
Sample C Male 7.4
Sample D Male 13.0
Subiculum
nTPM: 8.8
Samples: 4

Max nTPM: 13.5
Min nTPM: 3.8
Sample A Female 3.8
Sample B Female 9.0
Sample C Male 8.9
Sample D Male 13.5
Ventral hippocampus
nTPM: 8.6
Samples: 4

Max nTPM: 12.5
Min nTPM: 3.6
Sample A Female 9.0
Sample B Female 12.5
Sample C Male 3.6
Sample D Male 9.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.