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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:448.3 nTPM
HPA:448.3 nTPM
GTEx:196.9 nTPM
FANTOM5:647.5 Scaled Tags Per Million
Pig:464.3 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 448.3
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 419.4
1981 Female, age 72, midline 483.1
2048 Male, age 55, midline 479.8
2194 Female, age 79, both hemispheres 381.1
2816 Male, age 47, midline 378.2
2565 Male, age 75, midline 375.0
Cervical spinal cord, dorsal horn
nTPM: 448.3
2721 Male, age 90, both hemispheres 511.6
2173 Female, age 72, unknown 475.4
2069 Male, age 47, both hemispheres 455.8
1877 Male, age 55, unknown 430.4
2296 Male, age 66, both hemispheres 426.3
2297 Male, age 75, both hemispheres 390.1
Cervical spinal cord, ventral horn
nTPM: 383.5
2098 Female, age 72, unknown 488.3
2295 Male, age 66, both hemispheres 408.5
2068 Male, age 55, unknown 386.6
2809 Male, age 90, both hemispheres 376.9
2820 Female, age 79, both hemispheres 322.6
2480 Male, age 75, both hemispheres 318.1

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 196.9
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 196.9
Samples: 159

Max nTPM: 721.8
Min nTPM: 71.8
Std nTPM: 97.4
Median nTPM: 172.5
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 721.8
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 524.0
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 448.3
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 447.3
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 437.9
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 432.4
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 401.9
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 400.1
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 383.9
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 380.2
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 378.3
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 353.3
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 340.4
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 331.9
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 329.1
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 327.2
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 324.2
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 309.8
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 307.8
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 302.2
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 296.8
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 294.2
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 292.6
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 290.6
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 288.1
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 286.7
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 285.6
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 274.2
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 270.6
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 261.7
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 254.0
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 249.7
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 247.8
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 244.1
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 244.1
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 241.1
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 239.9
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 239.1
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 238.7
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 236.5
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 233.5
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 232.5
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 232.0
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 231.6
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 229.8
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 225.9
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 224.2
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 223.0
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 222.1
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 221.6
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 221.4
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 221.2
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 213.6
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 213.3
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 212.7
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 210.6
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 206.5
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 205.1
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 203.8
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 203.6
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 201.8
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 201.3
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 200.8
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 196.8
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 194.6
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 193.0
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 190.6
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 190.6
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 189.4
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 188.1
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 186.2
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 186.1
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 185.1
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 184.7
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 183.2
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 180.7
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 180.3
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 178.4
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 174.7
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 172.5
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 171.3
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 166.9
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 161.2
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 159.6
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 158.5
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 158.2
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 158.1
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 157.6
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 157.0
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 154.6
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 152.6
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 152.3
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 151.3
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 149.4
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 149.1
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 148.9
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 148.8
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 148.3
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 147.4
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 147.3
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 146.5
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 146.1
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 146.1
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 146.1
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 145.2
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 144.8
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 144.0
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 140.1
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 139.7
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 138.0
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 137.4
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 135.9
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 134.8
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 133.4
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 133.2
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 133.1
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 132.9
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 132.6
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 132.5
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 132.0
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 131.2
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 126.9
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 125.9
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 124.7
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 124.6
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 124.3
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 123.5
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 123.3
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 121.4
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 118.9
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 118.1
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 117.9
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 116.7
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 114.4
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 114.3
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 112.8
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 110.6
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 109.6
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 109.1
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 107.6
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 107.1
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 106.2
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 105.6
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 104.1
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 103.2
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 102.4
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 101.7
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 98.7
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 93.1
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 90.1
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 88.5
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 88.3
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 87.9
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 86.7
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 84.5
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 82.5
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 78.7
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 72.5
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 71.8
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 647.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 647.5
FF:10159-103A6 76 years, female 786.9
FF:10181-103D1 60 years, female 508.2

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 464.3
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 356.7
Samples: 4

Max nTPM: 428.4
Min nTPM: 216.4
Sample A Female 428.4
Sample B Female 393.8
Sample C Male 216.4
Sample D Male 388.2
Ventral spinal cord
nTPM: 464.3
Samples: 4

Max nTPM: 532.1
Min nTPM: 419.1
Sample A Female 480.6
Sample B Female 532.1
Sample C Male 425.4
Sample D Male 419.1

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