HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:49.8 nTPM
HPA:49.8 nTPM
GTEx:42.6 nTPM
FANTOM5:88.2 Scaled Tags Per Million
Pig:24.1 nTPM
Mouse:41.9 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA013958
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 49.8
Sample id Sample description nTPM
Hippocampus
nTPM: 48.2
1855 Male, age 76, left hemisphere 53.9
2148 Female, age 91, left hemisphere 49.2
1911 Female, age 85, right hemisphere 48.4
2529 Female, age 94, left hemisphere 47.7
1898 Male, age 80, left hemisphere 47.2
2621 Female, age 67, right hemisphere 42.8
Dentate gyrus
nTPM: 47.3
2010 Male, age 76, both hemispheres 52.0
1927 Female, age 91, both hemispheres 48.7
2530 Female, age 94, left hemisphere 47.8
2246 Female, age 85, both hemispheres 47.0
2531 Female, age 67, both hemispheres 46.5
2528 Male, age 74, both hemispheres 41.9
Entorhinal gyrus
nTPM: 45.6
2686 Male, age 75, right hemisphere 49.9
2117 Female, age 91, right hemisphere 48.6
1938 Female, age 85, left hemisphere 47.7
1787 Male, age 76, left hemisphere 43.5
2613 Female, age 94, left hemisphere 42.2
2764 Male, age 80, right hemisphere 42.0
Hippocampus, CA1
nTPM: 49.8
2045 Male, age 76, both hemispheres 63.7
1873 Female, age 85, both hemispheres 53.2
2749 Male, age 80, left hemisphere 47.9
2082 Female, age 91, right hemisphere 42.9
2527 Male, age 74, both hemispheres 41.4
Hippocampus, CA2
nTPM: 46.0
1892 Male, age 76, both hemispheres 53.1
1963 Male, age 80, left hemisphere 51.0
1940 Female, age 85, left hemisphere 44.7
2113 Female, age 91, right hemisphere 44.1
2437 Female, age 94, left hemisphere 42.5
2249 Male, age 74, both hemispheres 40.5
Hippocampus, CA3
nTPM: 46.0
1867 Male, age 76, both hemispheres 55.6
1891 Female, age 85, both hemispheres 53.6
2137 Male, age 80, left hemisphere 45.9
2861 Female, age 67, both hemispheres 44.1
2620 Female, age 94, left hemisphere 42.6
2436 Male, age 74, both hemispheres 34.6
Parahippocampal cortex
nTPM: 41.5
1990 Female, age 91, right hemisphere 45.2
2018 Male, age 76, both hemispheres 44.4
1850 Male, age 80, both hemispheres 44.3
2692 Male, age 74, both hemispheres 42.9
1933 Female, age 85, both hemispheres 41.5
2245 Female, age 91, both hemispheres 41.1
2532 Female, age 72, left hemisphere 40.9
2622 Female, age 67, right hemisphere 39.8
2250 Female, age 67, right hemisphere 37.6
2693 Female, age 94, both hemispheres 37.4
Perirhinal gyrus
nTPM: 39.6
1847 Female, age 91, left hemisphere 43.1
1841 Female, age 85, right hemisphere 41.1
2848 Male, age 76, right hemisphere 40.4
1794 Male, age 80, right hemisphere 38.2
2521 Female, age 94, right hemisphere 35.3
Subiculum
nTPM: 46.0
2729 Female, age 91, right hemisphere 50.2
2042 Male, age 76, both hemispheres 48.7
1901 Male, age 80, both hemispheres 46.6
2438 Female, age 94, left hemisphere 46.0
1977 Female, age 85, both hemispheres 44.6
2619 Male, age 74, both hemispheres 39.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 42.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 42.6
Samples: 197

Max nTPM: 114.9
Min nTPM: 14.4
Std nTPM: 16.3
Median nTPM: 39.2
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 114.9
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 114.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 110.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 100.1
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 80.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 80.2
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 77.1
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 75.2
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 74.1
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 70.6
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 70.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 88.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 88.2
FF:10153-102I9 76 years, female 91.8
FF:10169-103B7 60 years, female 84.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 24.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 19.5
Samples: 4

Max nTPM: 21.5
Min nTPM: 16.5
Sample A Female 21.5
Sample B Female 20.0
Sample C Male 20.1
Sample D Male 16.5
Entorhinal cortex
nTPM: 22.7
Samples: 4

Max nTPM: 24.9
Min nTPM: 19.8
Sample A Female 22.3
Sample B Female 24.9
Sample C Male 23.8
Sample D Male 19.8
Subiculum
nTPM: 24.1
Samples: 4

Max nTPM: 28.9
Min nTPM: 21.4
Sample A Female 28.9
Sample B Female 24.1
Sample C Male 21.4
Sample D Male 21.9
Ventral hippocampus
nTPM: 20.7
Samples: 4

Max nTPM: 23.8
Min nTPM: 17.7
Sample A Female 23.8
Sample B Female 21.4
Sample C Male 19.7
Sample D Male 17.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 41.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 35.3
Samples: 4

Max nTPM: 38.4
Min nTPM: 32.2
Sample A Male 38.4
Sample B Male 32.2
Sample C Female 38.2
Sample D Female 32.5
Hippocampal formation
nTPM: 41.9
Samples: 4

Max nTPM: 43.6
Min nTPM: 40.0
Sample A Male 42.7
Sample B Male 40.0
Sample C Female 43.6
Sample D Female 41.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
77800943 Antisense, RP_070219_01_B07, Mouse strain C57BL/6J (56 days, male) 1.6
67815553 Antisense, RP_040920_02_A02, Mouse strain C57BL/6J (56 days, male) 0.4

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The Human Protein Atlas

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