HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:14.3 nTPM
HPA:14.3 nTPM
GTEx:12.8 nTPM
FANTOM5:32.2 Scaled Tags Per Million
Pig:6.1 nTPM
Mouse:14.0 nTPM
Allen mouse:3.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA020137
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.3
Sample id Sample description nTPM
Hippocampus
nTPM: 9.9
1898 Male, age 80, left hemisphere 11.3
2148 Female, age 91, left hemisphere 10.9
2621 Female, age 67, right hemisphere 10.4
1855 Male, age 76, left hemisphere 9.5
2529 Female, age 94, left hemisphere 8.6
1911 Female, age 85, right hemisphere 8.3
Dentate gyrus
nTPM: 10.5
1927 Female, age 91, both hemispheres 14.7
2531 Female, age 67, both hemispheres 11.0
2528 Male, age 74, both hemispheres 10.1
2010 Male, age 76, both hemispheres 9.7
2246 Female, age 85, both hemispheres 9.5
2530 Female, age 94, left hemisphere 8.2
Entorhinal gyrus
nTPM: 11.0
2764 Male, age 80, right hemisphere 12.4
2686 Male, age 75, right hemisphere 12.1
1938 Female, age 85, left hemisphere 11.0
2613 Female, age 94, left hemisphere 10.9
1787 Male, age 76, left hemisphere 10.8
2117 Female, age 91, right hemisphere 9.0
Hippocampus, CA1
nTPM: 10.8
2749 Male, age 80, left hemisphere 12.3
1873 Female, age 85, both hemispheres 11.5
2045 Male, age 76, both hemispheres 10.3
2082 Female, age 91, right hemisphere 10.2
2527 Male, age 74, both hemispheres 9.8
Hippocampus, CA2
nTPM: 10.4
1892 Male, age 76, both hemispheres 14.3
1963 Male, age 80, left hemisphere 10.7
2113 Female, age 91, right hemisphere 10.3
2437 Female, age 94, left hemisphere 9.8
2249 Male, age 74, both hemispheres 8.7
1940 Female, age 85, left hemisphere 8.5
Hippocampus, CA3
nTPM: 9.9
2620 Female, age 94, left hemisphere 11.2
1867 Male, age 76, both hemispheres 10.7
2137 Male, age 80, left hemisphere 10.0
1891 Female, age 85, both hemispheres 9.9
2861 Female, age 67, both hemispheres 9.4
2436 Male, age 74, both hemispheres 8.1
Parahippocampal cortex
nTPM: 12.5
2693 Female, age 94, both hemispheres 16.8
2245 Female, age 91, both hemispheres 13.9
2622 Female, age 67, right hemisphere 13.9
1850 Male, age 80, both hemispheres 13.6
1990 Female, age 91, right hemisphere 13.1
2250 Female, age 67, right hemisphere 11.7
1933 Female, age 85, both hemispheres 10.8
2692 Male, age 74, both hemispheres 10.5
2532 Female, age 72, left hemisphere 10.4
2018 Male, age 76, both hemispheres 10.1
Perirhinal gyrus
nTPM: 14.3
1847 Female, age 91, left hemisphere 15.8
1794 Male, age 80, right hemisphere 14.8
2848 Male, age 76, right hemisphere 14.7
1841 Female, age 85, right hemisphere 13.8
2521 Female, age 94, right hemisphere 12.5
Subiculum
nTPM: 9.2
1977 Female, age 85, both hemispheres 10.6
2729 Female, age 91, right hemisphere 10.5
2619 Male, age 74, both hemispheres 10.0
2438 Female, age 94, left hemisphere 8.6
1901 Male, age 80, both hemispheres 8.3
2042 Male, age 76, both hemispheres 6.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.8
Samples: 197

Max nTPM: 29.9
Min nTPM: 1.5
Std nTPM: 6.1
Median nTPM: 11.7
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 29.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 26.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 26.2
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 25.6
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 25.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 25.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 24.9
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 24.3
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 24.2
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 23.5
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 23.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 32.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 32.2
FF:10169-103B7 60 years, female 40.8
FF:10153-102I9 76 years, female 23.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 6.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 6.1
Samples: 4

Max nTPM: 7.2
Min nTPM: 4.7
Sample A Female 7.2
Sample B Female 6.3
Sample C Male 6.1
Sample D Male 4.7
Entorhinal cortex
nTPM: 5.4
Samples: 4

Max nTPM: 6.3
Min nTPM: 3.7
Sample A Female 5.8
Sample B Female 6.3
Sample C Male 5.6
Sample D Male 3.7
Subiculum
nTPM: 5.6
Samples: 4

Max nTPM: 7.5
Min nTPM: 4.7
Sample A Female 7.5
Sample B Female 5.3
Sample C Male 5.0
Sample D Male 4.7
Ventral hippocampus
nTPM: 5.4
Samples: 4

Max nTPM: 5.6
Min nTPM: 4.8
Sample A Female 5.6
Sample B Female 4.8
Sample C Male 5.4
Sample D Male 5.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 14.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.0
Samples: 4

Max nTPM: 14.5
Min nTPM: 13.4
Sample A Male 13.7
Sample B Male 14.5
Sample C Female 14.2
Sample D Female 13.4
Hippocampal formation
nTPM: 12.5
Samples: 4

Max nTPM: 15.0
Min nTPM: 11.4
Sample A Male 15.0
Sample B Male 11.9
Sample C Female 11.4
Sample D Female 11.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.5
68157390 Antisense, RP_041116_02_D04, Mouse strain C57BL/6J (56 days, male) 3.5

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