HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:191.8 nTPM
HPA:191.8 nTPM
GTEx:187.5 nTPM
FANTOM5:234.8 Scaled Tags Per Million
Pig:91.7 nTPM
Mouse:100.2 nTPM
Allen mouse:10.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA074314Antibody CAB002500Antibody CAB010893
Glial cells Not detectedHighMedium
Neuronal cells MediumLowMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 191.8
Sample id Sample description nTPM
Hippocampus
nTPM: 189.7
2621 Female, age 67, right hemisphere 225.7
1855 Male, age 76, left hemisphere 209.9
1911 Female, age 85, right hemisphere 201.6
2148 Female, age 91, left hemisphere 185.4
2529 Female, age 94, left hemisphere 162.6
1898 Male, age 80, left hemisphere 153.1
Dentate gyrus
nTPM: 177.3
1927 Female, age 91, both hemispheres 201.7
2010 Male, age 76, both hemispheres 200.5
2531 Female, age 67, both hemispheres 184.6
2530 Female, age 94, left hemisphere 177.3
2246 Female, age 85, both hemispheres 158.0
2528 Male, age 74, both hemispheres 141.9
Entorhinal gyrus
nTPM: 136.1
2613 Female, age 94, left hemisphere 153.6
1938 Female, age 85, left hemisphere 139.5
1787 Male, age 76, left hemisphere 137.1
2117 Female, age 91, right hemisphere 134.9
2764 Male, age 80, right hemisphere 130.0
2686 Male, age 75, right hemisphere 121.6
Hippocampus, CA1
nTPM: 191.8
2749 Male, age 80, left hemisphere 253.4
2045 Male, age 76, both hemispheres 204.4
1873 Female, age 85, both hemispheres 199.2
2527 Male, age 74, both hemispheres 172.0
2082 Female, age 91, right hemisphere 130.1
Hippocampus, CA2
nTPM: 171.9
1963 Male, age 80, left hemisphere 267.2
1892 Male, age 76, both hemispheres 205.3
2437 Female, age 94, left hemisphere 144.2
2249 Male, age 74, both hemispheres 143.9
2113 Female, age 91, right hemisphere 139.7
1940 Female, age 85, left hemisphere 131.3
Hippocampus, CA3
nTPM: 180.2
2137 Male, age 80, left hemisphere 241.4
2861 Female, age 67, both hemispheres 225.0
2620 Female, age 94, left hemisphere 189.0
1867 Male, age 76, both hemispheres 160.7
1891 Female, age 85, both hemispheres 143.2
2436 Male, age 74, both hemispheres 121.9
Parahippocampal cortex
nTPM: 126.0
2245 Female, age 91, both hemispheres 156.1
2018 Male, age 76, both hemispheres 135.9
1933 Female, age 85, both hemispheres 130.3
2622 Female, age 67, right hemisphere 128.8
2532 Female, age 72, left hemisphere 128.5
2692 Male, age 74, both hemispheres 124.3
2250 Female, age 67, right hemisphere 124.1
1990 Female, age 91, right hemisphere 115.0
2693 Female, age 94, both hemispheres 111.4
1850 Male, age 80, both hemispheres 106.3
Perirhinal gyrus
nTPM: 117.6
2521 Female, age 94, right hemisphere 130.9
1847 Female, age 91, left hemisphere 119.6
1841 Female, age 85, right hemisphere 115.8
2848 Male, age 76, right hemisphere 113.3
1794 Male, age 80, right hemisphere 108.3
Subiculum
nTPM: 140.0
2042 Male, age 76, both hemispheres 174.0
1901 Male, age 80, both hemispheres 157.1
1977 Female, age 85, both hemispheres 141.1
2729 Female, age 91, right hemisphere 126.5
2438 Female, age 94, left hemisphere 124.7
2619 Male, age 74, both hemispheres 116.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 187.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 187.5
Samples: 197

Max nTPM: 561.6
Min nTPM: 16.0
Std nTPM: 71.4
Median nTPM: 175.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 561.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 409.5
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 408.2
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 360.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 337.3
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 334.7
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 323.2
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 316.5
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 314.9
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 310.7
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 308.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 234.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 234.8
FF:10153-102I9 76 years, female 271.8
FF:10169-103B7 60 years, female 197.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 91.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 91.7
Samples: 4

Max nTPM: 116.2
Min nTPM: 70.4
Sample A Female 116.2
Sample B Female 98.6
Sample C Male 70.4
Sample D Male 81.5
Entorhinal cortex
nTPM: 58.2
Samples: 4

Max nTPM: 68.0
Min nTPM: 48.2
Sample A Female 68.0
Sample B Female 49.0
Sample C Male 67.4
Sample D Male 48.2
Subiculum
nTPM: 59.6
Samples: 4

Max nTPM: 73.1
Min nTPM: 49.7
Sample A Female 73.1
Sample B Female 53.2
Sample C Male 62.4
Sample D Male 49.7
Ventral hippocampus
nTPM: 75.9
Samples: 4

Max nTPM: 101.7
Min nTPM: 54.9
Sample A Female 69.9
Sample B Female 54.9
Sample C Male 77.2
Sample D Male 101.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 100.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 86.0
Samples: 4

Max nTPM: 91.0
Min nTPM: 82.2
Sample A Male 84.1
Sample B Male 82.2
Sample C Female 86.8
Sample D Female 91.0
Hippocampal formation
nTPM: 100.2
Samples: 4

Max nTPM: 107.8
Min nTPM: 91.4
Sample A Male 101.6
Sample B Male 107.8
Sample C Female 99.8
Sample D Female 91.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.3
73818755 Antisense, RP_050921_01_G05, Mouse strain C57BL/6J (56 days, male) 10.3
71724822 Antisense, RP_050921_01_G05, Mouse strain C57BL/6J (56 days, male) 8.4

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