HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:20.3 nTPM
HPA:20.3 nTPM
GTEx:20.5 nTPM
FANTOM5:38.3 Scaled Tags Per Million
Pig:35.9 nTPM
Mouse:33.1 nTPM
Allen mouse:4.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.3
Sample id Sample description nTPM
Hippocampus
nTPM: 16.9
1898 Male, age 80, left hemisphere 20.3
1911 Female, age 85, right hemisphere 16.6
2621 Female, age 67, right hemisphere 16.6
1855 Male, age 76, left hemisphere 16.5
2529 Female, age 94, left hemisphere 16.1
2148 Female, age 91, left hemisphere 15.2
Dentate gyrus
nTPM: 16.7
1927 Female, age 91, both hemispheres 18.5
2246 Female, age 85, both hemispheres 17.5
2010 Male, age 76, both hemispheres 17.2
2528 Male, age 74, both hemispheres 17.1
2530 Female, age 94, left hemisphere 15.4
2531 Female, age 67, both hemispheres 14.5
Entorhinal gyrus
nTPM: 17.6
1938 Female, age 85, left hemisphere 19.5
2764 Male, age 80, right hemisphere 19.0
1787 Male, age 76, left hemisphere 18.6
2613 Female, age 94, left hemisphere 16.8
2117 Female, age 91, right hemisphere 16.2
2686 Male, age 75, right hemisphere 15.5
Hippocampus, CA1
nTPM: 18.9
2749 Male, age 80, left hemisphere 22.6
1873 Female, age 85, both hemispheres 19.5
2045 Male, age 76, both hemispheres 18.6
2527 Male, age 74, both hemispheres 17.0
2082 Female, age 91, right hemisphere 16.8
Hippocampus, CA2
nTPM: 17.8
1892 Male, age 76, both hemispheres 21.5
2249 Male, age 74, both hemispheres 18.4
1963 Male, age 80, left hemisphere 18.1
1940 Female, age 85, left hemisphere 17.7
2113 Female, age 91, right hemisphere 16.9
2437 Female, age 94, left hemisphere 14.4
Hippocampus, CA3
nTPM: 18.1
2137 Male, age 80, left hemisphere 20.7
1867 Male, age 76, both hemispheres 19.1
2436 Male, age 74, both hemispheres 18.3
1891 Female, age 85, both hemispheres 17.8
2620 Female, age 94, left hemisphere 17.0
2861 Female, age 67, both hemispheres 15.6
Parahippocampal cortex
nTPM: 17.5
1850 Male, age 80, both hemispheres 22.2
1933 Female, age 85, both hemispheres 19.2
1990 Female, age 91, right hemisphere 18.8
2693 Female, age 94, both hemispheres 17.5
2018 Male, age 76, both hemispheres 17.4
2250 Female, age 67, right hemisphere 17.3
2245 Female, age 91, both hemispheres 17.2
2532 Female, age 72, left hemisphere 16.6
2692 Male, age 74, both hemispheres 14.9
2622 Female, age 67, right hemisphere 14.2
Perirhinal gyrus
nTPM: 20.3
1841 Female, age 85, right hemisphere 21.9
1847 Female, age 91, left hemisphere 21.3
1794 Male, age 80, right hemisphere 20.9
2521 Female, age 94, right hemisphere 19.0
2848 Male, age 76, right hemisphere 18.5
Subiculum
nTPM: 16.7
1977 Female, age 85, both hemispheres 18.7
1901 Male, age 80, both hemispheres 18.3
2438 Female, age 94, left hemisphere 16.6
2729 Female, age 91, right hemisphere 15.8
2619 Male, age 74, both hemispheres 15.5
2042 Male, age 76, both hemispheres 15.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.5
Samples: 197

Max nTPM: 50.7
Min nTPM: 9.5
Std nTPM: 5.6
Median nTPM: 20.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 50.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 44.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 37.3
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 32.8
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 32.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 32.4
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 31.6
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 31.4
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 30.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 30.3
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 29.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 38.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 38.3
FF:10169-103B7 60 years, female 42.9
FF:10153-102I9 76 years, female 33.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 35.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 34.6
Samples: 4

Max nTPM: 40.6
Min nTPM: 29.4
Sample A Female 40.6
Sample B Female 35.0
Sample C Male 33.4
Sample D Male 29.4
Entorhinal cortex
nTPM: 34.5
Samples: 4

Max nTPM: 36.8
Min nTPM: 32.2
Sample A Female 36.8
Sample B Female 35.2
Sample C Male 33.6
Sample D Male 32.2
Subiculum
nTPM: 35.9
Samples: 4

Max nTPM: 42.7
Min nTPM: 31.6
Sample A Female 42.7
Sample B Female 34.0
Sample C Male 35.3
Sample D Male 31.6
Ventral hippocampus
nTPM: 33.4
Samples: 4

Max nTPM: 36.9
Min nTPM: 30.3
Sample A Female 36.9
Sample B Female 30.3
Sample C Male 33.7
Sample D Male 32.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 33.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 33.1
Samples: 4

Max nTPM: 34.6
Min nTPM: 29.9
Sample A Male 34.6
Sample B Male 34.5
Sample C Female 33.3
Sample D Female 29.9
Hippocampal formation
nTPM: 29.1
Samples: 4

Max nTPM: 31.5
Min nTPM: 27.6
Sample A Male 31.5
Sample B Male 27.6
Sample C Female 28.1
Sample D Female 29.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.1
69103916 Antisense, RP_050316_01_H11, Mouse strain C57BL/6J (56 days, male) 4.1

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