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SLC1A2
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TISSUE PRIMARY DATA THALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
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VALIDATION
Dictionary
Tissue proteome
Thalamus
THALAMUS - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:498.7 nTPM
HPA:498.7 nTPM
FANTOM5:359.2 Scaled Tags Per Million
Pig:263.2 nTPM
Mouse:326.3 nTPM
Allen mouse:12.6 Expression energy

THALAMUS - HPA Brain RNA-seq
Max nTPM 498.7
Sample id Sample description nTPM
Anterior thalamic nucleus, ventral
nTPM: 349.1
2497 Male, age 66, unknown 420.2
2032 Female, age 42, unknown 350.6
2396 Male, age 61, right hemisphere 276.6
Centromedial thalamic nucleus
nTPM: 412.5
2401 Male, age 76, right hemisphere 441.2
2279 Female, age 85, left hemisphere 383.8
Habenula
nTPM: 415.2
2276 Male, age 66, unknown 441.1
1957 Male, age 80, both hemispheres 434.0
2203 Male, age 61, left hemisphere 420.7
2252 Male, age 62, unknown 364.8
Lateral geniculate body
nTPM: 462.8
2857 Male, age 74, right hemisphere 609.1
2575 Female, age 94, right hemisphere 502.4
2399 Male, age 61, left hemisphere 500.2
2659 Male, age 66, unknown 451.4
2035 Female, age 72, unknown 444.1
1953 Male, age 62, unknown 427.1
2106 Female, age 67, right hemisphere 397.0
2841 Male, age 80, both hemispheres 371.1
Lateral thalamic nuclei
nTPM: 436.0
2573 Female, age 94, left hemisphere 526.8
2661 Female, age 72, unknown 511.9
2577 Male, age 74, both hemispheres 444.7
1903 Male, age 76, left hemisphere 374.1
2765 Female, age 67, both hemispheres 322.6
Medial dorsal thalamic nucleus
nTPM: 441.3
2572 Female, age 94, right hemisphere 584.0
1810 Male, age 48, unknown 481.8
2576 Male, age 74, both hemispheres 472.4
2498 Male, age 66, unknown 469.2
2492 Male, age 75, right hemisphere 466.0
2026 Male, age 62, unknown 458.2
2283 Male, age 80, right hemisphere 439.6
1859 Male, age 76, both hemispheres 432.7
1971 Male, age 61, right hemisphere 429.8
2660 Female, age 72, unknown 401.5
2402 Female, age 67, both hemispheres 390.3
1930 Female, age 42, unknown 357.7
2039 Female, age 72, unknown 353.5
Medial geniculate body
nTPM: 476.6
2657 Male, age 74, right hemisphere 580.5
2650 Female, age 94, left hemisphere 574.8
2571 Male, age 75, right hemisphere 528.5
2217 Female, age 72, unknown 449.9
1811 Female, age 42, unknown 414.0
2207 Male, age 80, right hemisphere 398.4
2049 Male, age 76, both hemispheres 390.2
Nucleus reuniens
nTPM: 322.2
2205 Male, age 80, left hemisphere 426.5
2212 Female, age 67, left hemisphere 303.1
2210 Female, age 85, left hemisphere 237.1
Nucleus rhomboideus
nTPM: 313.4
2206 Male, age 80, both hemispheres 441.7
2213 Female, age 67, left hemisphere 258.4
2280 Female, age 85, left hemisphere 240.3
Posterior thalamic nucleus
nTPM: 498.7
2649 Female, age 94, both hemispheres 628.2
2655 Male, age 74, right hemisphere 608.3
2495 Female, age 67, right hemisphere 396.3
2266 Male, age 76, right hemisphere 361.9
Pulvinar
nTPM: 461.8
2724 Male, age 74, right hemisphere 583.9
1932 Male, age 80, right hemisphere 511.0
2499 Male, age 66, unknown 497.8
1972 Male, age 62, unknown 494.2
2398 Male, age 61, left hemisphere 478.8
1899 Female, age 42, unknown 457.1
2582 Female, age 72, unknown 445.9
1929 Male, age 48, unknown 409.9
2496 Female, age 67, right hemisphere 374.5
2214 Male, age 76, right hemisphere 365.4
Subthalamic nucleus
nTPM: 334.4
2282 Male, age 61, both hemispheres 406.6
2406 Female, age 72, unknown 373.7
2124 Male, age 62, unknown 335.3
2216 Male, age 48, unknown 331.8
2779 Female, age 42, unknown 331.4
2056 Female, age 72, unknown 322.6
2275 Male, age 66, unknown 296.0
2658 Male, age 74, both hemispheres 278.1
Ventral posterolateral thalamic nucleus
nTPM: 452.3
2197 Male, age 80, both hemispheres 501.7
2570 Male, age 75, right hemisphere 476.1
2740 Male, age 76, right hemisphere 467.9
2581 Female, age 72, unknown 461.3
2578 Male, age 74, both hemispheres 404.9
2397 Male, age 61, right hemisphere 401.5
Ventral posteromedial thalamic nucleus
nTPM: 443.7
2758 Male, age 80, both hemispheres 506.0
2653 Male, age 74, both hemispheres 452.6
2127 Male, age 76, right hemisphere 438.1
2281 Male, age 75, right hemisphere 424.6
2202 Male, age 61, left hemisphere 397.1
Ventral thalamic nuclei
nTPM: 415.8
2858 Female, age 72, unknown 547.8
2204 Male, age 80, both hemispheres 450.8
2580 Male, age 66, unknown 431.6
1860 Male, age 76, both hemispheres 409.1
1845 Male, age 48, unknown 408.5
2285 Male, age 62, unknown 401.5
2652 Male, age 74, left hemisphere 376.6
1912 Female, age 42, unknown 374.3
2291 Female, age 72, unknown 341.9
Ventromedial nucleus
nTPM: 467.0
1982 Female, age 72, unknown 478.6
1822 Female, age 42, unknown 455.4
Zona incerta
nTPM: 331.1
2208 Male, age 80, right hemisphere 454.8
2403 Male, age 62, unknown 364.1
2663 Female, age 72, unknown 329.9
2822 Male, age 74, right hemisphere 254.5
2215 Male, age 66, unknown 252.2

THALAMUS - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 359.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Thalamus
Scaled Tags Per Million: 359.2
FF:10154-103A1 76 years, female 359.2

THALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 263.2
Pig sample Sample description nTPM
Thalamus
nTPM: 263.2
Samples: 4

Max nTPM: 388.0
Min nTPM: 168.7
Sample A Female 269.8
Sample B Female 226.3
Sample C Male 388.0
Sample D Male 168.7

THALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 326.3
Mouse sample Sample description nTPM
Thalamus
nTPM: 326.2
Samples: 4

Max nTPM: 344.9
Min nTPM: 282.3
Sample A Male 282.3
Sample B Male 336.1
Sample C Female 344.9
Sample D Female 341.6

THALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 12.6
Allen experiment id Experiment description Expression energy
Thalamus
Expression energy: 12.6
73521823 Antisense, RP_051101_03_B07, Mouse strain C57BL/6J (56 days, male) 13.9
69873839 Antisense, RP_050512_02_B03, Mouse strain C57BL/6J (56 days, male) 11.3

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by the Knut & Alice Wallenberg Foundation.