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CD81
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  • CD81
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:578.6 nTPM
FANTOM5:567.6 Scaled Tags Per Million
Pig:243.9 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA007234Antibody CAB002507
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected




CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 578.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 578.6
Samples: 246

Max nTPM: 1413.2
Min nTPM: 225.2
Std nTPM: 168.1
Median nTPM: 552.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1413.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 1206.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 1125.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 1067.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 1050.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 1027.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 995.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 939.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 922.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 903.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 902.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 900.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 893.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 885.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 877.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 875.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 842.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 822.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 805.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 804.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 801.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 794.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 794.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 786.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 785.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 776.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 773.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 767.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 760.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 756.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 756.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 753.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 752.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 746.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 741.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 740.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 737.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 737.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 735.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 727.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 726.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 724.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 719.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 713.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 711.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 706.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 706.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 703.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 701.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 698.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 697.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 696.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 693.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 693.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 692.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 691.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 688.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 686.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 682.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 681.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 674.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 668.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 666.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 665.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 664.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 660.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 656.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 655.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 654.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 653.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 651.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 650.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 643.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 641.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 640.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 638.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 634.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 634.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 633.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 627.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 626.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 621.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 616.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 612.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 609.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 609.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 607.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 605.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 603.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 598.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 595.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 595.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 593.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 590.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 589.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 588.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 582.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 580.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 579.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 579.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 579.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 575.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 574.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 574.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 573.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 573.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 573.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 572.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 567.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 567.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 564.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 563.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 561.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 561.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 560.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 558.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 558.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 556.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 554.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 554.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 554.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 554.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 552.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 552.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 551.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 549.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 547.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 547.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 546.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 546.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 544.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 542.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 540.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 539.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 534.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 533.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 532.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 532.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 530.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 529.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 528.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 527.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 525.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 524.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 522.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 522.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 520.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 517.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 516.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 513.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 512.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 512.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 512.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 512.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 508.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 503.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 503.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 503.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 497.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 493.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 492.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 492.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 491.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 489.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 489.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 487.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 487.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 487.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 482.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 481.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 481.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 480.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 479.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 479.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 472.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 472.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 470.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 469.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 469.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 468.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 468.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 467.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 465.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 464.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 463.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 461.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 459.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 456.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 456.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 455.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 455.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 453.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 451.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 449.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 447.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 445.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 444.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 440.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 440.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 437.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 437.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 437.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 434.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 433.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 431.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 430.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 429.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 428.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 428.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 426.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 415.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 413.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 412.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 411.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 405.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 403.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 403.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 402.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 399.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 397.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 396.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 396.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 394.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 394.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 392.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 392.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 390.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 389.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 388.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 388.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 384.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 384.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 383.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 381.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 380.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 378.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 375.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 364.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 344.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 343.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 323.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 309.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 279.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 260.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 247.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 225.2
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 567.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 567.6
FF:10164-103B2 76 years, female 567.6

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 243.9
Pig sample Sample description nTPM
Caudate
nTPM: 243.9
Samples: 4

Max nTPM: 282.0
Min nTPM: 216.2
Sample A Female 225.0
Sample B Female 252.3
Sample C Male 282.0
Sample D Male 216.2

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