AMYGDALA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:35.4 nTPM
HPA:35.4 nTPM
GTEx:22.6 nTPM
FANTOM5:77.7 Scaled Tags Per Million
Mouse:40.3 nTPM
Allen mouse:2.8 Expression energy

AMYGDALA - Annotated protein expression
Pending normal tissue analysis

AMYGDALA - HPA Brain RNA-seq
Max nTPM 35.4
Sample id Sample description nTPM
Amygdala
nTPM: 34.8
2517 Female, age 94, left hemisphere 37.2
2695 Female, age 67, right hemisphere 36.8
2514 Male, age 75, right hemisphere 35.8
1987 Female, age 91, left hemisphere 33.7
2814 Male, age 76, right hemisphere 30.8
Basal amygdala
nTPM: 33.9
2609 Male, age 75, right hemisphere 39.9
2243 Female, age 91, right hemisphere 34.7
2827 Female, age 67, right hemisphere 32.9
2110 Male, age 80, left hemisphere 32.1
2685 Female, age 94, left hemisphere 32.1
1955 Male, age 76, both hemispheres 31.5
Central amygdala
nTPM: 34.4
2515 Male, age 75, right hemisphere 38.2
2826 Female, age 94, left hemisphere 36.2
2239 Male, age 80, left hemisphere 33.9
2701 Female, age 91, right hemisphere 33.2
1905 Male, age 76, both hemispheres 30.4
Corticomedial amygdala
nTPM: 34.1
2428 Male, age 75, right hemisphere 40.6
2240 Male, age 76, both hemispheres 33.7
2429 Female, age 94, left hemisphere 33.3
2242 Female, age 91, right hemisphere 33.2
2829 Male, age 80, left hemisphere 33.2
2535 Female, age 67, right hemisphere 30.8
Lateral amygdala
nTPM: 35.4
2516 Male, age 75, right hemisphere 40.9
2830 Female, age 67, right hemisphere 36.3
2534 Female, age 94, left hemisphere 35.7
2255 Female, age 91, right hemisphere 34.6
2256 Male, age 80, left hemisphere 33.8
1883 Male, age 76, both hemispheres 30.9
Stria terminalis, bed nucleus
nTPM: 32.4
2201 Male, age 74, unknown 34.9
1974 Female, age 91, both hemispheres 31.3
2486 Female, age 94, both hemispheres 31.1

AMYGDALA - GTEx RNA-seqi
Average nTPM 22.6
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 22.6
Samples: 152

Max nTPM: 36.1
Min nTPM: 14.1
Std nTPM: 4.1
Median nTPM: 21.6
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 36.1
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 35.6
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 35.6
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 35.5
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 35.4
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 34.4
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 33.4
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 33.0
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 30.3
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 29.5
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 28.6
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 77.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 77.7
FF:10151-102I7 76 years, female 77.7

AMYGDALA - Mouse RNA-seqi
Average nTPM 40.3
Mouse sample Sample description nTPM
Amygdala
nTPM: 40.3
Samples: 4

Max nTPM: 42.2
Min nTPM: 37.0
Sample A Male 40.1
Sample B Male 37.0
Sample C Female 42.2
Sample D Female 41.9

AMYGDALA - Allen Mouse ISHi
Max Expression energy 2.8
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 2.8
73732149 Antisense, RP_051121_04_A07, Mouse strain C57BL/6J (56 days, male) 5.6
70474929 Antisense, RP_050623_01_D07, Mouse strain C57BL/6J (56 days, male) 3.1
68151390 Antisense, RP_041116_01_B01, Mouse strain C57BL/6J (56 days, male) 2.4
73930854 Antisense, RP_051214_04_D07, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.