HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:233.0 nTPM
HPA:233.0 nTPM
GTEx:255.2 nTPM
FANTOM5:322.8 Scaled Tags Per Million
Pig:250.7 nTPM
Mouse:1298.5 nTPM
Allen mouse:30.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001520Antibody HPA001528Antibody CAB017527
Glial cells LowMediumNot detected
Neuronal cells MediumMediumHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 233.0
Sample id Sample description nTPM
Hippocampus
nTPM: 208.3
1898 Male, age 80, left hemisphere 267.0
2529 Female, age 94, left hemisphere 204.7
2148 Female, age 91, left hemisphere 199.7
2621 Female, age 67, right hemisphere 199.0
1855 Male, age 76, left hemisphere 195.3
1911 Female, age 85, right hemisphere 184.2
Dentate gyrus
nTPM: 209.1
1927 Female, age 91, both hemispheres 245.2
2010 Male, age 76, both hemispheres 225.1
2528 Male, age 74, both hemispheres 210.4
2530 Female, age 94, left hemisphere 206.3
2246 Female, age 85, both hemispheres 194.9
2531 Female, age 67, both hemispheres 172.8
Entorhinal gyrus
nTPM: 198.8
2764 Male, age 80, right hemisphere 230.8
1938 Female, age 85, left hemisphere 212.5
1787 Male, age 76, left hemisphere 201.1
2117 Female, age 91, right hemisphere 193.9
2613 Female, age 94, left hemisphere 185.1
2686 Male, age 75, right hemisphere 169.4
Hippocampus, CA1
nTPM: 233.0
2749 Male, age 80, left hemisphere 327.9
2527 Male, age 74, both hemispheres 225.1
1873 Female, age 85, both hemispheres 223.2
2082 Female, age 91, right hemisphere 195.8
2045 Male, age 76, both hemispheres 192.9
Hippocampus, CA2
nTPM: 229.7
2249 Male, age 74, both hemispheres 275.7
1892 Male, age 76, both hemispheres 259.4
1963 Male, age 80, left hemisphere 255.4
2437 Female, age 94, left hemisphere 206.4
1940 Female, age 85, left hemisphere 191.8
2113 Female, age 91, right hemisphere 189.7
Hippocampus, CA3
nTPM: 225.0
2436 Male, age 74, both hemispheres 304.3
2137 Male, age 80, left hemisphere 249.6
1867 Male, age 76, both hemispheres 231.5
1891 Female, age 85, both hemispheres 201.4
2620 Female, age 94, left hemisphere 188.9
2861 Female, age 67, both hemispheres 174.2
Parahippocampal cortex
nTPM: 202.4
1850 Male, age 80, both hemispheres 242.7
1990 Female, age 91, right hemisphere 231.7
2250 Female, age 67, right hemisphere 218.4
2245 Female, age 91, both hemispheres 205.4
1933 Female, age 85, both hemispheres 202.5
2018 Male, age 76, both hemispheres 192.2
2693 Female, age 94, both hemispheres 190.3
2532 Female, age 72, left hemisphere 186.3
2622 Female, age 67, right hemisphere 177.3
2692 Male, age 74, both hemispheres 176.8
Perirhinal gyrus
nTPM: 229.1
1847 Female, age 91, left hemisphere 268.5
1794 Male, age 80, right hemisphere 248.5
1841 Female, age 85, right hemisphere 225.3
2521 Female, age 94, right hemisphere 209.3
2848 Male, age 76, right hemisphere 194.0
Subiculum
nTPM: 199.8
1901 Male, age 80, both hemispheres 225.4
1977 Female, age 85, both hemispheres 220.8
2619 Male, age 74, both hemispheres 195.8
2438 Female, age 94, left hemisphere 191.1
2729 Female, age 91, right hemisphere 188.5
2042 Male, age 76, both hemispheres 177.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 255.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 255.2
Samples: 197

Max nTPM: 521.0
Min nTPM: 85.2
Std nTPM: 88.3
Median nTPM: 236.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 521.0
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 504.8
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 495.7
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 479.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 479.2
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 473.0
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 465.4
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 443.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 442.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 441.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 430.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 322.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 322.8
FF:10169-103B7 60 years, female 461.4
FF:10153-102I9 76 years, female 184.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 250.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 250.7
Samples: 4

Max nTPM: 319.8
Min nTPM: 172.3
Sample A Female 319.8
Sample B Female 260.4
Sample C Male 250.3
Sample D Male 172.3
Entorhinal cortex
nTPM: 210.6
Samples: 4

Max nTPM: 268.3
Min nTPM: 160.1
Sample A Female 218.1
Sample B Female 268.3
Sample C Male 195.7
Sample D Male 160.1
Subiculum
nTPM: 193.6
Samples: 4

Max nTPM: 248.8
Min nTPM: 163.4
Sample A Female 248.8
Sample B Female 182.7
Sample C Male 179.4
Sample D Male 163.4
Ventral hippocampus
nTPM: 230.3
Samples: 4

Max nTPM: 269.5
Min nTPM: 162.7
Sample A Female 267.7
Sample B Female 162.7
Sample C Male 269.5
Sample D Male 221.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1298.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1210.4
Samples: 4

Max nTPM: 1270.5
Min nTPM: 1151.4
Sample A Male 1151.4
Sample B Male 1197.5
Sample C Female 1270.5
Sample D Female 1222.2
Hippocampal formation
nTPM: 1298.5
Samples: 4

Max nTPM: 1381.2
Min nTPM: 1201.7
Sample A Male 1381.2
Sample B Male 1201.7
Sample C Female 1310.5
Sample D Female 1300.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 30.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 30.1
70528264 Antisense, RP_050623_02_C01, Mouse strain C57BL/6J (56 days, male) 30.1

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