HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:167.3 nTPM
HPA:167.3 nTPM
GTEx:175.1 nTPM
FANTOM5:237.0 Scaled Tags Per Million
Pig:124.5 nTPM
Mouse:410.9 nTPM
Allen mouse:19.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006550
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 167.3
Sample id Sample description nTPM
Hippocampus
nTPM: 165.3
1898 Male, age 80, left hemisphere 172.4
1855 Male, age 76, left hemisphere 171.9
1911 Female, age 85, right hemisphere 164.9
2621 Female, age 67, right hemisphere 164.1
2529 Female, age 94, left hemisphere 163.4
2148 Female, age 91, left hemisphere 155.3
Dentate gyrus
nTPM: 163.2
2010 Male, age 76, both hemispheres 174.1
1927 Female, age 91, both hemispheres 167.8
2246 Female, age 85, both hemispheres 167.5
2530 Female, age 94, left hemisphere 159.6
2531 Female, age 67, both hemispheres 155.7
2528 Male, age 74, both hemispheres 154.4
Entorhinal gyrus
nTPM: 155.9
1938 Female, age 85, left hemisphere 165.3
1787 Male, age 76, left hemisphere 160.7
2117 Female, age 91, right hemisphere 156.2
2764 Male, age 80, right hemisphere 155.7
2613 Female, age 94, left hemisphere 149.7
2686 Male, age 75, right hemisphere 147.9
Hippocampus, CA1
nTPM: 167.3
2749 Male, age 80, left hemisphere 177.2
1873 Female, age 85, both hemispheres 172.7
2045 Male, age 76, both hemispheres 167.8
2527 Male, age 74, both hemispheres 161.3
2082 Female, age 91, right hemisphere 157.3
Hippocampus, CA2
nTPM: 163.6
1892 Male, age 76, both hemispheres 172.0
1940 Female, age 85, left hemisphere 166.2
2249 Male, age 74, both hemispheres 164.4
1963 Male, age 80, left hemisphere 161.2
2437 Female, age 94, left hemisphere 161.1
2113 Female, age 91, right hemisphere 156.9
Hippocampus, CA3
nTPM: 161.9
1867 Male, age 76, both hemispheres 172.4
2137 Male, age 80, left hemisphere 166.6
2436 Male, age 74, both hemispheres 164.1
1891 Female, age 85, both hemispheres 162.3
2861 Female, age 67, both hemispheres 155.8
2620 Female, age 94, left hemisphere 150.1
Parahippocampal cortex
nTPM: 161.0
2018 Male, age 76, both hemispheres 173.5
2250 Female, age 67, right hemisphere 166.2
1933 Female, age 85, both hemispheres 165.8
2245 Female, age 91, both hemispheres 164.5
1850 Male, age 80, both hemispheres 162.2
2693 Female, age 94, both hemispheres 160.0
1990 Female, age 91, right hemisphere 159.1
2532 Female, age 72, left hemisphere 157.7
2692 Male, age 74, both hemispheres 151.8
2622 Female, age 67, right hemisphere 149.4
Perirhinal gyrus
nTPM: 165.9
1847 Female, age 91, left hemisphere 172.2
1841 Female, age 85, right hemisphere 167.2
2521 Female, age 94, right hemisphere 167.1
1794 Male, age 80, right hemisphere 163.9
2848 Male, age 76, right hemisphere 159.2
Subiculum
nTPM: 162.3
2438 Female, age 94, left hemisphere 170.8
2042 Male, age 76, both hemispheres 164.7
1977 Female, age 85, both hemispheres 164.5
1901 Male, age 80, both hemispheres 163.9
2729 Female, age 91, right hemisphere 157.1
2619 Male, age 74, both hemispheres 152.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 175.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 175.1
Samples: 197

Max nTPM: 319.6
Min nTPM: 104.3
Std nTPM: 37.3
Median nTPM: 168.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 319.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 313.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 276.2
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 273.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 271.5
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 270.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 263.0
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 260.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 258.6
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 250.6
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 244.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 237.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 237.0
FF:10169-103B7 60 years, female 300.3
FF:10153-102I9 76 years, female 173.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 124.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 124.6
Samples: 4

Max nTPM: 163.5
Min nTPM: 97.4
Sample A Female 163.5
Sample B Female 126.5
Sample C Male 110.8
Sample D Male 97.4
Entorhinal cortex
nTPM: 93.7
Samples: 4

Max nTPM: 112.2
Min nTPM: 72.1
Sample A Female 106.6
Sample B Female 112.2
Sample C Male 83.9
Sample D Male 72.1
Subiculum
nTPM: 88.0
Samples: 4

Max nTPM: 113.7
Min nTPM: 75.8
Sample A Female 113.7
Sample B Female 78.3
Sample C Male 75.8
Sample D Male 84.0
Ventral hippocampus
nTPM: 106.9
Samples: 4

Max nTPM: 128.3
Min nTPM: 77.1
Sample A Female 124.5
Sample B Female 77.1
Sample C Male 97.7
Sample D Male 128.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 410.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 321.3
Samples: 4

Max nTPM: 343.6
Min nTPM: 289.7
Sample A Male 289.7
Sample B Male 333.2
Sample C Female 343.6
Sample D Female 318.7
Hippocampal formation
nTPM: 410.9
Samples: 4

Max nTPM: 456.5
Min nTPM: 374.6
Sample A Male 427.5
Sample B Male 374.6
Sample C Female 456.5
Sample D Female 384.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 19.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 19.7
68193057 Antisense, RP_040826_01_F03, Mouse strain C57BL/6J (56 days, male) 19.7

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