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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:169.4 nTPM
HPA:169.4 nTPM
GTEx:206.1 nTPM
FANTOM5:267.4 Scaled Tags Per Million
Pig:131.6 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 169.4
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 160.0
1981 Female, age 72, midline 169.6
2816 Male, age 47, midline 158.4
2048 Male, age 55, midline 158.2
2194 Female, age 79, both hemispheres 157.6
2565 Male, age 75, midline 156.2
Cervical spinal cord, dorsal horn
nTPM: 169.4
2069 Male, age 47, both hemispheres 176.4
2173 Female, age 72, unknown 175.5
2296 Male, age 66, both hemispheres 169.9
2721 Male, age 90, both hemispheres 166.3
2297 Male, age 75, both hemispheres 164.8
1877 Male, age 55, unknown 163.3
Cervical spinal cord, ventral horn
nTPM: 162.5
2098 Female, age 72, unknown 178.7
2809 Male, age 90, both hemispheres 165.5
2480 Male, age 75, both hemispheres 160.0
2295 Male, age 66, both hemispheres 159.9
2068 Male, age 55, unknown 158.7
2820 Female, age 79, both hemispheres 151.9

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 206.1
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 206.1
Samples: 159

Max nTPM: 402.0
Min nTPM: 114.5
Std nTPM: 46.5
Median nTPM: 199.4
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 402.0
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 397.9
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 333.9
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 328.3
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 321.0
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 288.2
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 285.6
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 285.2
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 280.8
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 271.6
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 270.0
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 268.1
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 267.7
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 265.5
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 263.7
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 260.9
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 254.9
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 254.8
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 254.5
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 254.0
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 248.0
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 247.3
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 246.8
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 246.0
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 246.0
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 245.5
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 244.7
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 241.3
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 241.2
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 240.6
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 240.2
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 239.8
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 239.7
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 239.2
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 238.9
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 238.5
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 238.3
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 236.5
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 236.0
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 235.6
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 234.0
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 232.1
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 231.7
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 229.4
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 229.0
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 228.8
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 227.9
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 226.8
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 226.7
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 226.2
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 225.6
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 225.4
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 223.0
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 222.4
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 221.2
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 220.7
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 220.5
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 219.3
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 217.6
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 217.3
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 217.3
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 216.8
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 212.8
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 211.9
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 211.5
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 211.3
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 210.0
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 209.9
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 209.4
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 207.3
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 206.1
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 205.9
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 204.0
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 202.7
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 202.6
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 202.4
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 201.6
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 201.3
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 201.0
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 199.4
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 197.9
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 197.3
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 196.6
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 196.5
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 196.2
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 194.1
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 193.8
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 193.6
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 193.4
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 193.4
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 193.1
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 193.0
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 193.0
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 192.4
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 192.2
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 191.2
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 190.9
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 190.9
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 190.4
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 189.0
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 187.8
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 186.6
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 186.6
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 186.5
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 186.2
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 185.5
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 184.7
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 183.9
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 181.9
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 181.3
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 181.0
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 180.4
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 178.7
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 177.7
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 177.6
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 177.4
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 177.2
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 176.7
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 176.3
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 175.3
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 171.5
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 169.6
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 168.3
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 167.5
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 166.6
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 165.7
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 165.7
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 165.3
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 164.9
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 164.3
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 164.1
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 162.1
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 160.0
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 159.0
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 158.8
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 158.0
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 157.7
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 156.0
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 155.5
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 155.2
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 154.9
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 154.4
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 153.0
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 152.6
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 152.1
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 151.5
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 151.1
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 148.4
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 147.4
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 147.4
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 147.0
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 145.6
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 142.3
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 140.8
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 139.4
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 132.9
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 126.2
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 118.9
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 114.5
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 267.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 267.4
FF:10181-103D1 60 years, female 291.9
FF:10159-103A6 76 years, female 243.0

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 131.6
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 118.3
Samples: 4

Max nTPM: 128.8
Min nTPM: 108.7
Sample A Female 117.3
Sample B Female 128.8
Sample C Male 118.4
Sample D Male 108.7
Ventral spinal cord
nTPM: 131.6
Samples: 4

Max nTPM: 144.9
Min nTPM: 122.5
Sample A Female 122.5
Sample B Female 144.9
Sample C Male 128.9
Sample D Male 130.1

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