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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:48.0 nTPM
HPA:48.0 nTPM
GTEx:52.5 nTPM
FANTOM5:72.4 Scaled Tags Per Million
Pig:59.6 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 48.0
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 46.2
1981 Female, age 72, midline 49.2
2048 Male, age 55, midline 49.2
2816 Male, age 47, midline 44.5
2194 Female, age 79, both hemispheres 44.3
2565 Male, age 75, midline 43.7
Cervical spinal cord, dorsal horn
nTPM: 48.0
2069 Male, age 47, both hemispheres 52.1
2173 Female, age 72, unknown 50.3
2296 Male, age 66, both hemispheres 47.5
1877 Male, age 55, unknown 47.3
2297 Male, age 75, both hemispheres 45.9
2721 Male, age 90, both hemispheres 44.7
Cervical spinal cord, ventral horn
nTPM: 46.9
2098 Female, age 72, unknown 51.4
2295 Male, age 66, both hemispheres 48.2
2480 Male, age 75, both hemispheres 48.1
2809 Male, age 90, both hemispheres 47.5
2068 Male, age 55, unknown 44.2
2820 Female, age 79, both hemispheres 41.9

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 52.5
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 52.5
Samples: 159

Max nTPM: 83.4
Min nTPM: 28.9
Std nTPM: 9.3
Median nTPM: 51.2
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 83.4
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 79.7
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 77.1
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 73.5
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 73.1
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 71.6
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 71.0
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 70.9
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 70.4
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 70.0
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 69.8
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 69.3
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 67.5
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 67.2
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 64.4
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 63.9
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 63.8
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 62.8
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 62.5
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 62.4
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 62.4
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 62.3
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 61.6
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 61.4
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 61.2
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 61.1
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 61.1
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 61.1
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 60.8
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 60.2
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 60.1
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 59.2
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 59.2
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 59.0
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 58.8
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 58.8
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 58.7
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 58.6
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 58.5
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 58.3
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 58.1
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 57.9
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 57.7
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 57.6
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 57.0
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 56.9
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 56.7
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 56.6
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 56.6
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 56.4
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 56.3
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 55.9
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 55.8
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 55.8
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 55.7
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 55.3
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 55.2
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 55.1
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 54.9
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 54.9
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 54.8
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 54.5
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 54.0
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 53.8
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 53.7
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 53.5
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 53.3
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 53.3
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 53.3
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 52.9
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 52.9
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 52.6
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 52.6
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 52.5
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 52.5
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 52.5
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 51.5
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 51.4
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 51.2
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 51.2
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 51.0
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 50.9
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 50.8
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 50.7
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 50.3
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 50.2
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 50.1
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 50.1
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 49.8
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 49.7
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 49.6
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 49.5
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 49.4
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 49.4
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 49.3
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 49.3
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 49.1
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 48.9
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 48.9
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 48.2
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 48.1
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 48.1
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 48.1
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 47.9
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 47.9
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 47.8
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 47.8
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 47.4
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 47.4
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 47.3
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 47.1
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 47.0
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 47.0
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 46.7
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 46.5
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 46.4
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 46.3
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 46.0
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 45.7
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 45.5
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 45.4
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 45.3
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 45.1
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 45.1
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 44.9
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 44.9
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 44.7
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 44.6
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 44.6
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 44.4
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 44.2
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 44.2
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 44.1
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 44.0
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 43.7
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 43.6
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 43.4
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 43.2
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 43.1
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 43.1
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 42.9
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 42.9
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 42.3
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 42.0
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 41.9
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 41.3
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 41.2
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 41.2
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 40.7
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 40.4
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 40.0
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 39.3
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 38.7
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 38.6
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 35.1
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 34.2
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 34.0
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 33.6
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 28.9
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 72.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 72.4
FF:10159-103A6 76 years, female 83.6
FF:10181-103D1 60 years, female 61.1

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 59.6
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 56.0
Samples: 4

Max nTPM: 60.9
Min nTPM: 52.2
Sample A Female 52.2
Sample B Female 60.9
Sample C Male 58.6
Sample D Male 52.3
Ventral spinal cord
nTPM: 59.6
Samples: 4

Max nTPM: 64.5
Min nTPM: 51.3
Sample A Female 51.3
Sample B Female 60.4
Sample C Male 62.1
Sample D Male 64.5

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