HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:47.9 nTPM
HPA:47.9 nTPM
GTEx:50.7 nTPM
FANTOM5:90.0 Scaled Tags Per Million
Pig:55.8 nTPM
Mouse:31.3 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB003691Antibody CAB021888
Glial cells Not detectedHigh
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 47.9
Sample id Sample description nTPM
Hippocampus
nTPM: 44.4
2529 Female, age 94, left hemisphere 49.5
2621 Female, age 67, right hemisphere 46.0
1898 Male, age 80, left hemisphere 45.6
1911 Female, age 85, right hemisphere 45.4
2148 Female, age 91, left hemisphere 41.1
1855 Male, age 76, left hemisphere 38.7
Dentate gyrus
nTPM: 43.7
2530 Female, age 94, left hemisphere 51.8
2010 Male, age 76, both hemispheres 46.3
2528 Male, age 74, both hemispheres 43.7
1927 Female, age 91, both hemispheres 40.6
2246 Female, age 85, both hemispheres 40.5
2531 Female, age 67, both hemispheres 39.6
Entorhinal gyrus
nTPM: 46.2
2117 Female, age 91, right hemisphere 54.6
2764 Male, age 80, right hemisphere 47.2
1787 Male, age 76, left hemisphere 47.1
1938 Female, age 85, left hemisphere 44.8
2686 Male, age 75, right hemisphere 42.0
2613 Female, age 94, left hemisphere 41.6
Hippocampus, CA1
nTPM: 41.1
2527 Male, age 74, both hemispheres 45.3
1873 Female, age 85, both hemispheres 43.0
2082 Female, age 91, right hemisphere 42.2
2749 Male, age 80, left hemisphere 40.8
2045 Male, age 76, both hemispheres 34.3
Hippocampus, CA2
nTPM: 44.5
1963 Male, age 80, left hemisphere 47.0
2249 Male, age 74, both hemispheres 46.3
2437 Female, age 94, left hemisphere 45.6
2113 Female, age 91, right hemisphere 44.2
1940 Female, age 85, left hemisphere 42.3
1892 Male, age 76, both hemispheres 41.8
Hippocampus, CA3
nTPM: 41.1
1891 Female, age 85, both hemispheres 49.1
1867 Male, age 76, both hemispheres 41.4
2436 Male, age 74, both hemispheres 41.4
2620 Female, age 94, left hemisphere 40.3
2861 Female, age 67, both hemispheres 38.7
2137 Male, age 80, left hemisphere 35.7
Parahippocampal cortex
nTPM: 44.1
1990 Female, age 91, right hemisphere 48.9
2532 Female, age 72, left hemisphere 46.5
2245 Female, age 91, both hemispheres 45.5
1850 Male, age 80, both hemispheres 45.1
2692 Male, age 74, both hemispheres 44.9
2018 Male, age 76, both hemispheres 44.6
1933 Female, age 85, both hemispheres 44.2
2250 Female, age 67, right hemisphere 43.6
2693 Female, age 94, both hemispheres 39.3
2622 Female, age 67, right hemisphere 38.5
Perirhinal gyrus
nTPM: 43.4
1794 Male, age 80, right hemisphere 45.0
1841 Female, age 85, right hemisphere 44.1
2848 Male, age 76, right hemisphere 43.7
2521 Female, age 94, right hemisphere 42.6
1847 Female, age 91, left hemisphere 41.4
Subiculum
nTPM: 47.9
2438 Female, age 94, left hemisphere 50.9
2042 Male, age 76, both hemispheres 50.8
1977 Female, age 85, both hemispheres 49.1
1901 Male, age 80, both hemispheres 48.7
2619 Male, age 74, both hemispheres 47.0
2729 Female, age 91, right hemisphere 41.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 50.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 50.7
Samples: 197

Max nTPM: 101.7
Min nTPM: 28.8
Std nTPM: 15.2
Median nTPM: 46.4
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 101.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 100.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 99.0
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 90.8
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 88.6
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 86.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 85.6
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 82.9
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 82.3
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 82.2
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 82.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 90.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 90.0
FF:10153-102I9 76 years, female 116.2
FF:10169-103B7 60 years, female 63.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 55.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 55.6
Samples: 4

Max nTPM: 68.9
Min nTPM: 45.9
Sample A Female 68.9
Sample B Female 50.0
Sample C Male 57.6
Sample D Male 45.9
Entorhinal cortex
nTPM: 55.8
Samples: 4

Max nTPM: 62.6
Min nTPM: 48.8
Sample A Female 58.2
Sample B Female 62.6
Sample C Male 53.7
Sample D Male 48.8
Subiculum
nTPM: 51.8
Samples: 4

Max nTPM: 68.3
Min nTPM: 44.1
Sample A Female 68.3
Sample B Female 48.6
Sample C Male 46.1
Sample D Male 44.1
Ventral hippocampus
nTPM: 47.0
Samples: 4

Max nTPM: 53.6
Min nTPM: 41.0
Sample A Female 46.4
Sample B Female 41.0
Sample C Male 53.6
Sample D Male 46.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 31.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 28.1
Samples: 4

Max nTPM: 32.1
Min nTPM: 22.2
Sample A Male 30.5
Sample B Male 32.1
Sample C Female 27.4
Sample D Female 22.2
Hippocampal formation
nTPM: 31.3
Samples: 4

Max nTPM: 31.5
Min nTPM: 30.9
Sample A Male 31.1
Sample B Male 31.5
Sample C Female 30.9
Sample D Female 31.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
76097716 Antisense, RP_060626_01_C12, Mouse strain C57BL/6J (56 days, male) 1.5
112204566 Antisense, RP_110421_01_C08, Mouse strain C57BL/6J (56 days, male) 1.1

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