PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:68.5 nTPM
HPA:68.5 nTPM
FANTOM5:101.3 Scaled Tags Per Million
Pig:40.4 nTPM
Mouse:16.7 nTPM
Allen mouse:7.0 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 68.5
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 58.4
2090 Male, age 80, both hemispheres 64.3
2301 Female, age 85, both hemispheres 60.4
2188 Female, age 91, both hemispheres 60.2
1984 Male, age 76, both hemispheres 48.5
Area postrema
nTPM: 54.3
2306 Male, age 80, both hemispheres 59.4
2054 Male, age 76, both hemispheres 53.7
2799 Male, age 61, both hemispheres 49.6
Cuneate nuclei
nTPM: 54.2
2381 Male, age 80, both hemispheres 56.3
2376 Male, age 61, both hemispheres 55.2
2131 Male, age 76, both hemispheres 51.2
Dorsal cochlear nucleus
nTPM: 56.7
2370 Male, age 61, both hemispheres 60.1
2187 Female, age 91, both hemispheres 59.6
2378 Male, age 80, both hemispheres 59.4
2802 Male, age 74, right hemisphere 52.9
2058 Male, age 76, both hemispheres 51.5
Dorsal medullary reticular nucleus
nTPM: 52.7
2373 Male, age 61, both hemispheres 55.1
2088 Male, age 76, both hemispheres 53.2
2040 Female, age 85, both hemispheres 49.7
Dorsal motor vagal complex
nTPM: 55.4
2807 Female, age 85, both hemispheres 79.9
2813 Female, age 72, unknown 58.6
2133 Female, age 91, both hemispheres 56.3
2643 Male, age 74, both hemispheres 56.2
2185 Male, age 76, both hemispheres 52.6
2000 Male, age 74, unknown 49.2
2844 Male, age 55, unknown 47.4
2797 Male, age 61, both hemispheres 42.7
Dorsal tegmental nucleus
nTPM: 63.0
2358 Male, age 61, both hemispheres 87.2
2326 Male, age 74, both hemispheres 59.4
1936 Male, age 76, left hemisphere 54.1
2083 Male, age 80, both hemispheres 51.3
Dorsolateral tegmental area
nTPM: 63.8
2337 Male, age 61, both hemispheres 108.2
2360 Male, age 74, both hemispheres 57.8
2654 Male, age 80, both hemispheres 54.6
2141 Male, age 76, both hemispheres 50.4
2751 Female, age 85, both hemispheres 48.2
Gigantocellular reticular nuclei, medullary
nTPM: 51.7
2310 Male, age 80, both hemispheres 55.8
2462 Male, age 74, both hemispheres 52.8
2022 Male, age 76, right hemisphere 51.5
2314 Male, age 61, both hemispheres 50.5
1876 Female, age 85, both hemispheres 50.0
2387 Female, age 91, both hemispheres 49.5
Gigantocellular reticular nuclei, pars
nTPM: 52.5
2706 Male, age 80, both hemispheres 55.9
2330 Male, age 80, both hemispheres 55.5
2336 Male, age 61, both hemispheres 52.0
2084 Female, age 85, both hemispheres 51.6
2168 Male, age 76, both hemispheres 47.4
Inferior olive
nTPM: 57.1
2628 Female, age 91, both hemispheres 60.8
2379 Male, age 80, both hemispheres 59.1
2178 Male, age 61, both hemispheres 57.6
2085 Female, age 85, both hemispheres 54.6
2563 Male, age 74, both hemispheres 53.3
Kolliker-Fuse nucleus
nTPM: 56.4
2315 Male, age 76, right hemisphere 57.4
2793 Female, age 91, left hemisphere 56.9
2163 Male, age 80, both hemispheres 54.8
Lateral lemniscal nuclei
nTPM: 50.3
2746 Female, age 85, left hemisphere 52.8
2320 Female, age 91, left hemisphere 51.4
2169 Male, age 76, both hemispheres 50.3
2036 Male, age 80, both hemispheres 49.0
2453 Male, age 74, right hemisphere 47.9
Lateral medullary reticular nucleus
nTPM: 61.2
2305 Male, age 74, both hemispheres 71.1
2852 Male, age 80, both hemispheres 63.2
2374 Male, age 61, both hemispheres 61.8
2190 Female, age 85, both hemispheres 60.1
2804 Female, age 91, both hemispheres 58.2
2044 Male, age 76, both hemispheres 53.0
Lateral parabrachial nucleus
nTPM: 58.2
2792 Male, age 76, both hemispheres 69.0
2013 Male, age 80, both hemispheres 58.5
2790 Male, age 61, both hemispheres 53.0
2139 Female, age 85, right hemisphere 52.5
Lateral vestibular nucleus
nTPM: 56.4
2311 Male, age 80, both hemispheres 62.8
2184 Male, age 76, both hemispheres 50.0
Locus coeruleus
nTPM: 52.1
2123 Female, age 91, both hemispheres 56.1
2720 Male, age 74, both hemispheres 54.8
2317 Female, age 72, unknown 53.0
2162 Male, age 80, both hemispheres 51.6
2788 Male, age 74, unknown 51.3
1980 Male, age 76, both hemispheres 50.4
2014 Male, age 55, unknown 47.4
Medial olivary nucleus
nTPM: 68.4
1943 Male, age 61, both hemispheres 85.3
2851 Male, age 80, both hemispheres 67.5
1962 Male, age 76, both hemispheres 63.8
2138 Female, age 91, both hemispheres 57.0
Medial parabrachial nucleus
nTPM: 53.6
2854 Male, age 80, both hemispheres 60.0
2170 Female, age 91, both hemispheres 55.1
2786 Male, age 76, both hemispheres 54.1
2156 Male, age 61, both hemispheres 52.5
2463 Female, age 85, right hemisphere 46.3
Medial periolivary nuclei
nTPM: 53.1
2081 Male, age 80, both hemispheres 59.0
2791 Male, age 74, right hemisphere 55.2
2458 Female, age 91, both hemispheres 54.6
2063 Male, age 76, both hemispheres 49.2
2171 Female, age 85, both hemispheres 47.5
Medial vestibular nucleus
nTPM: 55.2
2624 Male, age 61, both hemispheres 70.1
2801 Male, age 74, both hemispheres 57.1
2743 Female, age 85, both hemispheres 53.4
2134 Male, age 76, both hemispheres 51.4
2803 Female, age 91, both hemispheres 49.5
2093 Male, age 80, both hemispheres 49.4
Motor facial nucleus
nTPM: 52.6
2365 Male, age 74, right hemisphere 59.4
2697 Female, age 85, both hemispheres 59.2
2126 Male, age 61, both hemispheres 55.2
2795 Female, age 91, both hemispheres 49.5
2062 Male, age 76, both hemispheres 46.8
2327 Male, age 80, both hemispheres 45.4
Motor hypoglossal nucleus
nTPM: 53.1
2182 Male, age 80, both hemispheres 60.2
2132 Female, age 85, both hemispheres 57.1
2277 Male, age 76, both hemispheres 51.4
2461 Male, age 61, both hemispheres 51.3
2125 Female, age 91, both hemispheres 45.7
Motor trigeminal nucleus
nTPM: 55.4
2335 Male, age 61, both hemispheres 66.2
2321 Female, age 91, both hemispheres 55.3
2560 Male, age 74, both hemispheres 53.2
2079 Male, age 80, both hemispheres 51.4
2309 Male, age 76, both hemispheres 50.9
Nuclei of the trapezoid body
nTPM: 47.6
2166 Male, age 80, both hemispheres 50.5
1983 Male, age 76, both hemispheres 49.2
2368 Female, age 91, both hemispheres 46.2
2735 Female, age 85, both hemispheres 46.1
2159 Male, age 61, both hemispheres 45.9
Nucleus ambiguus
nTPM: 55.6
2071 Male, age 76, both hemispheres 60.7
2096 Female, age 85, both hemispheres 50.4
Nucleus cuneatus
nTPM: 55.8
2808 Female, age 85, both hemispheres 71.1
2380 Male, age 80, both hemispheres 59.0
2564 Male, age 74, both hemispheres 54.8
2100 Male, age 76, both hemispheres 52.0
2805 Female, age 91, both hemispheres 50.4
2562 Male, age 61, both hemispheres 47.5
Nucleus gracilis
nTPM: 64.1
2299 Female, age 85, both hemispheres 69.6
2627 Male, age 74, both hemispheres 64.9
2382 Male, age 80, both hemispheres 57.7
Nucleus raphe magnus
nTPM: 49.6
2051 Male, age 76, both hemispheres 51.4
2455 Male, age 74, both hemispheres 50.9
2459 Female, age 91, both hemispheres 50.4
2328 Male, age 80, both hemispheres 49.0
2160 Male, age 61, both hemispheres 48.1
2172 Female, age 85, both hemispheres 48.1
Nucleus raphe obscurus
nTPM: 58.2
2142 Male, age 76, midline 62.3
2845 Female, age 85, midline 58.8
2800 Male, age 61, midline 53.6
Nucleus raphe pallidus
nTPM: 68.5
1924 Male, age 61, midline 87.2
2145 Male, age 76, midline 60.2
2183 Male, age 80, midline 58.1
Nucleus tractus solitarii
nTPM: 57.5
2191 Female, age 85, both hemispheres 70.8
2307 Male, age 80, both hemispheres 56.5
2144 Female, age 91, right hemisphere 53.3
2656 Male, age 76, both hemispheres 49.5
Paramedian reticular nucleus
nTPM: 54.7
2052 Male, age 76, both hemispheres 63.2
2313 Male, age 61, both hemispheres 56.7
2050 Female, age 85, both hemispheres 50.2
2057 Male, age 80, both hemispheres 48.9
Parvicellular reticular nuclei
nTPM: 53.3
2095 Male, age 76, both hemispheres 55.9
2119 Male, age 80, both hemispheres 53.9
2558 Male, age 74, both hemispheres 50.0
Parvicellular reticular nuclei, medullary
nTPM: 52.6
2091 Female, age 85, both hemispheres 57.3
2189 Female, age 91, both hemispheres 50.9
2181 Male, age 80, left hemisphere 49.8
Peritrigeminal nucleus
nTPM: 62.4
2067 Female, age 85, both hemispheres 68.2
2179 Male, age 61, both hemispheres 61.0
2136 Male, age 76, both hemispheres 57.9
Pontine nuclei
nTPM: 51.0
2115 Male, age 80, left hemisphere 59.4
2319 Female, age 91, both hemispheres 57.7
2109 Female, age 72, unknown 51.2
2454 Male, age 74, left hemisphere 50.1
2787 Female, age 85, both hemispheres 49.7
1863 Male, age 55, unknown 47.2
2727 Male, age 61, right hemisphere 46.9
1968 Male, age 76, left hemisphere 46.2
Pontine raphe nucleus
nTPM: 51.2
2853 Male, age 76, midline 53.4
2122 Female, age 85, midline 49.1
Posteroventral cochlear nucleus
nTPM: 61.2
2341 Male, age 80, both hemispheres 71.1
2135 Female, age 91, both hemispheres 68.3
2371 Male, age 61, both hemispheres 61.0
2070 Male, age 76, both hemispheres 53.3
2752 Female, age 85, both hemispheres 52.3
Prepositus hypoglossal nucleus
nTPM: 55.3
2086 Male, age 80, both hemispheres 57.8
2855 Female, age 85, right hemisphere 52.8
Principal sensory trigeminal nucleus
nTPM: 51.6
2367 Female, age 91, left hemisphere 56.1
2324 Male, age 76, both hemispheres 54.0
2008 Male, age 80, left hemisphere 48.4
2158 Male, age 61, both hemispheres 48.0
Reticular pontine nucleus, caudal
nTPM: 50.1
2092 Male, age 76, both hemispheres 53.0
2457 Female, age 91, both hemispheres 51.5
2559 Male, age 74, both hemispheres 50.7
2332 Male, age 80, right hemisphere 45.1
Reticular pontine nucleus, oral
nTPM: 51.4
2361 Male, age 74, both hemispheres 54.3
2167 Male, age 76, both hemispheres 53.0
1939 Male, age 80, both hemispheres 51.4
2366 Female, age 91, both hemispheres 50.7
2012 Female, age 85, both hemispheres 47.4
Reticulotegmental nucleus
nTPM: 52.8
2452 Male, age 74, both hemispheres 53.4
2333 Male, age 80, both hemispheres 53.2
2322 Female, age 91, both hemispheres 52.7
2325 Male, age 76, both hemispheres 52.0
Spinal trigeminal nucleus, caudal
nTPM: 55.9
2312 Male, age 61, both hemispheres 62.3
2642 Male, age 74, both hemispheres 57.9
2308 Male, age 80, both hemispheres 55.0
2390 Female, age 91, both hemispheres 52.6
2447 Male, age 76, both hemispheres 51.7
Spinal trigeminal nucleus, interpolar
nTPM: 55.8
2625 Male, age 61, both hemispheres 59.3
2386 Female, age 85, both hemispheres 59.2
2033 Male, age 80, both hemispheres 56.1
2389 Female, age 91, both hemispheres 54.8
2066 Male, age 76, right hemisphere 49.8
Spinal trigeminal nucleus, oral
nTPM: 51.8
2164 Male, age 80, both hemispheres 54.3
1978 Male, age 76, both hemispheres 51.3
2737 Female, age 85, both hemispheres 49.9
Spinal vestibular nucleus
nTPM: 53.9
2796 Male, age 61, both hemispheres 67.6
2806 Female, age 85, both hemispheres 53.8
2780 Male, age 80, both hemispheres 52.9
2748 Male, age 76, both hemispheres 51.8
2384 Male, age 74, both hemispheres 48.9
2186 Female, age 91, both hemispheres 48.7
Subcoeruleus area
nTPM: 52.6
2451 Male, age 74, both hemispheres 54.9
2323 Female, age 91, left hemisphere 54.8
1958 Male, age 80, both hemispheres 51.5
2089 Male, age 76, left hemisphere 51.0
2369 Female, age 85, left hemisphere 50.7
Superior olive
nTPM: 53.2
2364 Male, age 74, right hemisphere 57.9
2561 Female, age 91, both hemispheres 57.0
2020 Male, age 76, both hemispheres 55.7
2329 Male, age 80, right hemisphere 49.9
1875 Female, age 85, both hemispheres 45.6
Superior vestibular nucleus
nTPM: 56.6
2383 Male, age 74, both hemispheres 58.6
2015 Male, age 80, both hemispheres 56.3
2061 Male, age 76, both hemispheres 55.1
Ventral medullary reticular nucleus
nTPM: 52.0
2060 Male, age 76, both hemispheres 52.3
2372 Male, age 61, both hemispheres 51.7
Ventral periolivary nuclei
nTPM: 53.4
2794 Female, age 91, left hemisphere 59.9
2023 Male, age 76, both hemispheres 57.3
2165 Male, age 80, both hemispheres 48.3
2130 Female, age 85, both hemispheres 48.1
Ventrolateral medulla, A1-C1 cell groups
nTPM: 59.6
2118 Male, age 80, both hemispheres 63.2
2741 Female, age 85, both hemispheres 60.8
2302 Female, age 91, both hemispheres 60.6
2180 Male, age 61, both hemispheres 59.9
1986 Male, age 76, both hemispheres 53.5
Ventrolateral tegmental area, A5 NE cell group
nTPM: 55.6
2359 Male, age 61, both hemispheres 68.7
2840 Female, age 85, both hemispheres 56.0
2161 Male, age 80, both hemispheres 55.5
1959 Male, age 76, both hemispheres 52.1
2456 Female, age 91, both hemispheres 50.8
2449 Male, age 74, both hemispheres 50.6

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 101.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 76.1
FF:10165-103B3 76 years, female 119.8
FF:10182-103D2 60 years, female 32.4
Medulla oblongata
Scaled Tags Per Million: 101.3
FF:10038-101F2 18-64 years, mixed 132.7
FF:10155-103A2 76 years, female 128.5
FF:10174-103C3 60 years, female 42.6
Pons
Scaled Tags Per Million: 80.2
FF:10033-101E6 18-54 years, mixed 80.2

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 40.4
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 40.4
Samples: 4

Max nTPM: 49.9
Min nTPM: 31.9
Sample A Female 31.9
Sample B Female 32.6
Sample C Male 49.9
Sample D Male 47.2
Pons
nTPM: 39.7
Samples: 4

Max nTPM: 52.2
Min nTPM: 28.3
Sample A Female 32.7
Sample B Female 28.3
Sample C Male 52.2
Sample D Male 45.7

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 16.7
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 16.8
Samples: 4

Max nTPM: 20.2
Min nTPM: 14.0
Sample A Male 14.9
Sample B Male 14.0
Sample C Female 17.9
Sample D Female 20.2

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 7.0
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 7.0
68443369 Antisense, RP_050111_01_H03, Mouse strain C57BL/6J (56 days, male) 7.0
Pons
Expression energy: 6.5
68443369 Antisense, RP_050111_01_H03, Mouse strain C57BL/6J (56 days, male) 6.5

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