HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:24.8 nTPM
HPA:24.8 nTPM
GTEx:23.3 nTPM
FANTOM5:34.3 Scaled Tags Per Million
Pig:13.0 nTPM
Mouse:30.2 nTPM
Allen mouse:5.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB034258
Glial cells Medium
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.8
Sample id Sample description nTPM
Hippocampus
nTPM: 23.5
1855 Male, age 76, left hemisphere 24.3
2529 Female, age 94, left hemisphere 23.8
1898 Male, age 80, left hemisphere 23.6
1911 Female, age 85, right hemisphere 23.6
2148 Female, age 91, left hemisphere 23.3
2621 Female, age 67, right hemisphere 22.5
Dentate gyrus
nTPM: 23.7
2528 Male, age 74, both hemispheres 25.0
2010 Male, age 76, both hemispheres 24.1
2531 Female, age 67, both hemispheres 23.7
2246 Female, age 85, both hemispheres 23.6
1927 Female, age 91, both hemispheres 23.3
2530 Female, age 94, left hemisphere 22.7
Entorhinal gyrus
nTPM: 23.7
2613 Female, age 94, left hemisphere 24.7
1787 Male, age 76, left hemisphere 23.7
2764 Male, age 80, right hemisphere 23.6
2117 Female, age 91, right hemisphere 23.5
1938 Female, age 85, left hemisphere 23.4
2686 Male, age 75, right hemisphere 23.2
Hippocampus, CA1
nTPM: 24.0
2045 Male, age 76, both hemispheres 24.9
1873 Female, age 85, both hemispheres 24.7
2082 Female, age 91, right hemisphere 24.2
2749 Male, age 80, left hemisphere 23.5
2527 Male, age 74, both hemispheres 22.8
Hippocampus, CA2
nTPM: 23.9
1963 Male, age 80, left hemisphere 24.7
1940 Female, age 85, left hemisphere 24.5
2113 Female, age 91, right hemisphere 24.1
2249 Male, age 74, both hemispheres 24.0
2437 Female, age 94, left hemisphere 23.4
1892 Male, age 76, both hemispheres 22.9
Hippocampus, CA3
nTPM: 23.5
1891 Female, age 85, both hemispheres 25.0
2620 Female, age 94, left hemisphere 24.7
2137 Male, age 80, left hemisphere 23.4
2436 Male, age 74, both hemispheres 23.1
1867 Male, age 76, both hemispheres 22.9
2861 Female, age 67, both hemispheres 21.8
Parahippocampal cortex
nTPM: 23.9
2532 Female, age 72, left hemisphere 25.0
2693 Female, age 94, both hemispheres 24.5
2250 Female, age 67, right hemisphere 24.3
1933 Female, age 85, both hemispheres 24.1
1850 Male, age 80, both hemispheres 24.0
2692 Male, age 74, both hemispheres 23.9
1990 Female, age 91, right hemisphere 23.8
2018 Male, age 76, both hemispheres 23.5
2622 Female, age 67, right hemisphere 23.2
2245 Female, age 91, both hemispheres 22.7
Perirhinal gyrus
nTPM: 23.8
1841 Female, age 85, right hemisphere 24.7
2848 Male, age 76, right hemisphere 24.5
1847 Female, age 91, left hemisphere 23.7
1794 Male, age 80, right hemisphere 23.0
2521 Female, age 94, right hemisphere 23.0
Subiculum
nTPM: 24.8
2438 Female, age 94, left hemisphere 26.1
2042 Male, age 76, both hemispheres 25.9
2729 Female, age 91, right hemisphere 25.6
1901 Male, age 80, both hemispheres 24.2
1977 Female, age 85, both hemispheres 24.1
2619 Male, age 74, both hemispheres 22.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.3
Samples: 197

Max nTPM: 41.1
Min nTPM: 15.1
Std nTPM: 3.2
Median nTPM: 23.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 41.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 32.5
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 30.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 30.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 30.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 30.0
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 29.8
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 29.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 29.1
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 29.1
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 29.0
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.3
FF:10169-103B7 60 years, female 35.5
FF:10153-102I9 76 years, female 33.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 13.0
Samples: 4

Max nTPM: 14.5
Min nTPM: 10.8
Sample A Female 14.3
Sample B Female 12.4
Sample C Male 14.5
Sample D Male 10.8
Entorhinal cortex
nTPM: 10.2
Samples: 4

Max nTPM: 12.1
Min nTPM: 8.8
Sample A Female 8.8
Sample B Female 10.9
Sample C Male 12.1
Sample D Male 9.0
Subiculum
nTPM: 10.5
Samples: 4

Max nTPM: 12.1
Min nTPM: 9.4
Sample A Female 12.1
Sample B Female 9.4
Sample C Male 10.5
Sample D Male 10.1
Ventral hippocampus
nTPM: 11.9
Samples: 4

Max nTPM: 14.8
Min nTPM: 8.3
Sample A Female 11.1
Sample B Female 8.3
Sample C Male 14.8
Sample D Male 13.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 30.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 30.2
Samples: 4

Max nTPM: 32.9
Min nTPM: 27.4
Sample A Male 28.1
Sample B Male 32.5
Sample C Female 32.9
Sample D Female 27.4
Hippocampal formation
nTPM: 29.5
Samples: 4

Max nTPM: 34.8
Min nTPM: 25.7
Sample A Male 34.8
Sample B Male 29.5
Sample C Female 25.7
Sample D Female 27.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.6
72727 Antisense, RP_040407_01_A09, Mouse strain C57BL/6J (56 days, male) 5.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.