HIPPOCAMPAL FORMATION - Expression summary
Mouse brain, Intensity
Hippocampal formationi 		142.241
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:12.2 nTPM
HPA:12.2 nTPM
GTEx:11.5 nTPM
FANTOM5:26.1 Scaled Tags Per Million
Pig:8.2 nTPM
Mouse:7.2 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA069176
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody CAB079007
Hippocampal formation mean intensity 142.241
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 106.504
Molecular layer of the dentate gyrus 87.921
Granular dentate gyrus 44.132
CA1 - oriens layer 91.524
CA1 - pyramidal layer 69.858
CA1 - radiatum layer 94.654
CA2 - oriens layer 94.321
CA2 - pyramidal layer 78.731
CA2 - radiatum layer 99.788
CA3 - oriens layer 95.949
CA3 - pyramidal layer 74.779
CA3 - radiatum layer 97.745
Stratum lucidum 119.778
Lacunosum moleculare 80.399
Subiculum 69.637

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.2
Sample id Sample description nTPM
Hippocampus
nTPM: 11.3
1855 Male, age 76, left hemisphere 12.8
1911 Female, age 85, right hemisphere 11.5
2148 Female, age 91, left hemisphere 11.4
2621 Female, age 67, right hemisphere 11.1
1898 Male, age 80, left hemisphere 10.7
2529 Female, age 94, left hemisphere 10.3
Dentate gyrus
nTPM: 11.8
2010 Male, age 76, both hemispheres 13.8
2531 Female, age 67, both hemispheres 11.8
1927 Female, age 91, both hemispheres 11.7
2246 Female, age 85, both hemispheres 11.3
2528 Male, age 74, both hemispheres 11.2
2530 Female, age 94, left hemisphere 11.2
Entorhinal gyrus
nTPM: 10.4
1787 Male, age 76, left hemisphere 10.7
2686 Male, age 75, right hemisphere 10.6
1938 Female, age 85, left hemisphere 10.4
2117 Female, age 91, right hemisphere 10.4
2764 Male, age 80, right hemisphere 10.4
2613 Female, age 94, left hemisphere 10.3
Hippocampus, CA1
nTPM: 12.2
2045 Male, age 76, both hemispheres 14.1
2749 Male, age 80, left hemisphere 12.9
1873 Female, age 85, both hemispheres 12.0
2082 Female, age 91, right hemisphere 11.3
2527 Male, age 74, both hemispheres 10.7
Hippocampus, CA2
nTPM: 11.4
1892 Male, age 76, both hemispheres 12.3
1940 Female, age 85, left hemisphere 12.2
1963 Male, age 80, left hemisphere 12.0
2113 Female, age 91, right hemisphere 11.1
2249 Male, age 74, both hemispheres 11.1
2437 Female, age 94, left hemisphere 9.9
Hippocampus, CA3
nTPM: 11.7
1867 Male, age 76, both hemispheres 12.7
2436 Male, age 74, both hemispheres 12.7
2137 Male, age 80, left hemisphere 11.8
2861 Female, age 67, both hemispheres 11.2
1891 Female, age 85, both hemispheres 11.0
2620 Female, age 94, left hemisphere 11.0
Parahippocampal cortex
nTPM: 10.7
2018 Male, age 76, both hemispheres 11.3
1933 Female, age 85, both hemispheres 11.2
2693 Female, age 94, both hemispheres 11.1
1850 Male, age 80, both hemispheres 10.8
2250 Female, age 67, right hemisphere 10.7
2532 Female, age 72, left hemisphere 10.7
2622 Female, age 67, right hemisphere 10.7
2245 Female, age 91, both hemispheres 10.5
1990 Female, age 91, right hemisphere 10.0
2692 Male, age 74, both hemispheres 10.0
Perirhinal gyrus
nTPM: 10.7
2848 Male, age 76, right hemisphere 11.3
2521 Female, age 94, right hemisphere 11.1
1841 Female, age 85, right hemisphere 10.7
1794 Male, age 80, right hemisphere 10.5
1847 Female, age 91, left hemisphere 10.0
Subiculum
nTPM: 10.5
2729 Female, age 91, right hemisphere 11.3
2042 Male, age 76, both hemispheres 11.1
1901 Male, age 80, both hemispheres 10.6
1977 Female, age 85, both hemispheres 10.4
2619 Male, age 74, both hemispheres 9.9
2438 Female, age 94, left hemisphere 9.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.5
Samples: 197

Max nTPM: 24.3
Min nTPM: 6.2
Std nTPM: 2.7
Median nTPM: 11.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 24.3
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 19.5
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 19.4
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 19.1
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 17.8
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 17.6
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 17.1
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 17.1
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 17.0
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 16.7
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 16.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 26.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.1
FF:10153-102I9 76 years, female 29.2
FF:10169-103B7 60 years, female 23.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 8.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 8.1
Samples: 4

Max nTPM: 9.2
Min nTPM: 7.2
Sample A Female 8.9
Sample B Female 7.2
Sample C Male 9.2
Sample D Male 7.2
Entorhinal cortex
nTPM: 6.4
Samples: 4

Max nTPM: 6.8
Min nTPM: 5.6
Sample A Female 5.6
Sample B Female 6.8
Sample C Male 6.6
Sample D Male 6.7
Subiculum
nTPM: 8.2
Samples: 4

Max nTPM: 8.4
Min nTPM: 7.9
Sample A Female 7.9
Sample B Female 8.4
Sample C Male 7.9
Sample D Male 8.4
Ventral hippocampus
nTPM: 8.2
Samples: 4

Max nTPM: 8.7
Min nTPM: 7.6
Sample A Female 8.7
Sample B Female 8.4
Sample C Male 7.6
Sample D Male 8.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 7.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 6.2
Samples: 4

Max nTPM: 7.0
Min nTPM: 4.7
Sample A Male 7.0
Sample B Male 6.5
Sample C Female 6.4
Sample D Female 4.7
Hippocampal formation
nTPM: 7.2
Samples: 4

Max nTPM: 8.5
Min nTPM: 6.2
Sample A Male 6.2
Sample B Male 7.0
Sample C Female 8.5
Sample D Female 7.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
68797504 Antisense, RP_050210_02_C08, Mouse strain C57BL/6J (56 days, male) 0.5

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The Human Protein Atlas

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