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ING4
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  • ING4
PROTEIN STRUCTURE
ANTIBODIES
AND
VALIDATION
Protein structures
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

ING4
Synonyms my036, p29ING4
Gene descriptioni

Full gene name according to HGNC.

Inhibitor of growth family member 4
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Read more
Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 12
Cytoband p13.31
Chromosome location (bp) 6650301 - 6663142
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

9
Ensembl ENSG00000111653 (version 103.38)
Entrez gene 51147
HGNC HGNC:19423
UniProt Q9UNL4 (UniProt - Evidence at protein level)
neXtProt NX_Q9UNL4
Antibodypedia ING4 antibodies


PROTEIN STRUCTUREi

The Structure section provides predicted structures from the Alphafold protein structure database and available experimental structures from Protein Data Bank (PDB).

In the Structure drop-down menu all experimental structures from PDB are available for selection and display. The structures are displayed using the NGL Viewer and can be zoomed-in and rotated either manually or by checking the Autorotate box. The Color scheme can be selected to show the residue index, chain name or confidence score (as B-factors and pLDDT score for experimental and predicted structures, respectively). The positions for available antigen sequences in the structure are shown if Antigens is turned to ON, and the Variants slider can be used to show the positions of clinical and population variants.https://github.com/nglviewer/ngl

Read more

Predicted


Description: Structure prediction from Alphafold project. Structure version 2

# Chains: 1      # Clinical variants: 0      # Population variants: 104

Antigens:

Off
On

Variants:

Off
Clinical
Population

Color scheme:

Confidence
Residue index
Chain name

Autorotate:

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On



PROTEIN BROWSERi

The protein browser displays the antigen location on the target protein(s) and the features of the target protein. The tabs at the top of the protein view section can be used to switch between the different splice variants to which an antigen has been mapped.

At the top of the view, the position of the antigen (identified by the corresponding HPA identifier) is shown as a green bar. A yellow triangle on the bar indicates a <100% sequence identity to the protein target.

Below the antigens, the maximum percent sequence identity of the protein to all other proteins from other human genes is displayed, using a sliding window of 10 aa residues (HsID 10) or 50 aa residues (HsID 50). The region with the lowest possible identity is always selected for antigen design, with a maximum identity of 60% allowed for designing a single-target antigen (read more).

The curve in blue displays the predicted antigenicity i.e. the tendency for different regions of the protein to generate an immune response, with peak regions being predicted to be more antigenic.The curve shows average values based on a sliding window approach using an in-house propensity scale. (read more).

If a signal peptide is predicted by a majority of the signal peptide predictors SPOCTOPUS, SignalP 4.0, and Phobius (turquoise) and/or transmembrane regions (orange) are predicted by MDM, these are displayed.

Low complexity regions are shown in yellow and InterPro regions in green. Common (purple) and unique (grey) regions between different splice variants of the gene are also displayed (read more), and at the bottom of the protein view is the protein scale.
ING4-201
ING4-202
ING4-203
ING4-204
ING4-206
ING4-207
ING4-208
ING4-217
ING4-218


PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The ENSP identifier links to the Ensembl website protein summary, while the ENST identifier links to the Ensembl website transcript summary for the selected splice variant. The data in the UniProt column can be expanded to show links to all matching UniProt identifiers for this protein.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The Gene Ontology terms assigned to this protein are listed if expanding the Gene ontology column. The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide (according to a majority of the signal peptide predictors SPOCTOPUS, SignalP 4.0, and Phobius) and the number of predicted transmembrane region(s) (according to MDM) are also reported.
Splice variant UniProt Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
ING4-201
ENSP00000343396
ENST00000341550
Q9UNL4 [Direct mapping]
Inhibitor of growth protein 4
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000123 [histone acetyltransferase complex]
GO:0003713 [transcription coactivator activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005829 [cytosol]
GO:0006260 [DNA replication]
GO:0006325 [chromatin organization]
GO:0006473 [protein acetylation]
GO:0006915 [apoptotic process]
GO:0006978 [DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator]
GO:0007049 [cell cycle]
GO:0007050 [cell cycle arrest]
GO:0008285 [negative regulation of cell population proliferation]
GO:0016573 [histone acetylation]
GO:0035064 [methylated histone binding]
GO:0043065 [positive regulation of apoptotic process]
GO:0043966 [histone H3 acetylation]
GO:0043981 [histone H4-K5 acetylation]
GO:0043982 [histone H4-K8 acetylation]
GO:0043983 [histone H4-K12 acetylation]
GO:0045111 [intermediate filament cytoskeleton]
GO:0045892 [negative regulation of transcription, DNA-templated]
GO:0045893 [positive regulation of transcription, DNA-templated]
GO:0045926 [negative regulation of growth]
GO:0046872 [metal ion binding]
GO:0070776 [MOZ/MORF histone acetyltransferase complex]
Show all
248 aa
28.4 kDa
No 0
ING4-202
ENSP00000380024
ENST00000396807
Q9UNL4 [Direct mapping]
Inhibitor of growth protein 4
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000123 [histone acetyltransferase complex]
GO:0003713 [transcription coactivator activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005829 [cytosol]
GO:0006260 [DNA replication]
GO:0006325 [chromatin organization]
GO:0006473 [protein acetylation]
GO:0006915 [apoptotic process]
GO:0006978 [DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator]
GO:0007049 [cell cycle]
GO:0007050 [cell cycle arrest]
GO:0008285 [negative regulation of cell population proliferation]
GO:0016573 [histone acetylation]
GO:0035064 [methylated histone binding]
GO:0043065 [positive regulation of apoptotic process]
GO:0043966 [histone H3 acetylation]
GO:0043981 [histone H4-K5 acetylation]
GO:0043982 [histone H4-K8 acetylation]
GO:0043983 [histone H4-K12 acetylation]
GO:0045111 [intermediate filament cytoskeleton]
GO:0045892 [negative regulation of transcription, DNA-templated]
GO:0045893 [positive regulation of transcription, DNA-templated]
GO:0045926 [negative regulation of growth]
GO:0046872 [metal ion binding]
GO:0070776 [MOZ/MORF histone acetyltransferase complex]
Show all
249 aa
28.5 kDa
No 0
ING4-203
ENSP00000412705
ENST00000412586
Q9UNL4 [Direct mapping]
Inhibitor of growth protein 4
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000123 [histone acetyltransferase complex]
GO:0003713 [transcription coactivator activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005829 [cytosol]
GO:0006260 [DNA replication]
GO:0006325 [chromatin organization]
GO:0006473 [protein acetylation]
GO:0006915 [apoptotic process]
GO:0006978 [DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator]
GO:0007049 [cell cycle]
GO:0007050 [cell cycle arrest]
GO:0008285 [negative regulation of cell population proliferation]
GO:0016573 [histone acetylation]
GO:0035064 [methylated histone binding]
GO:0043065 [positive regulation of apoptotic process]
GO:0043966 [histone H3 acetylation]
GO:0043981 [histone H4-K5 acetylation]
GO:0043982 [histone H4-K8 acetylation]
GO:0043983 [histone H4-K12 acetylation]
GO:0045111 [intermediate filament cytoskeleton]
GO:0045892 [negative regulation of transcription, DNA-templated]
GO:0045893 [positive regulation of transcription, DNA-templated]
GO:0045926 [negative regulation of growth]
GO:0046872 [metal ion binding]
GO:0070776 [MOZ/MORF histone acetyltransferase complex]
Show all
246 aa
28.2 kDa
No 0
ING4-204
ENSP00000414008
ENST00000423703
Q9UNL4 [Direct mapping]
Inhibitor of growth protein 4
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000123 [histone acetyltransferase complex]
GO:0003713 [transcription coactivator activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005829 [cytosol]
GO:0006260 [DNA replication]
GO:0006325 [chromatin organization]
GO:0006473 [protein acetylation]
GO:0006915 [apoptotic process]
GO:0006978 [DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator]
GO:0007049 [cell cycle]
GO:0007050 [cell cycle arrest]
GO:0008285 [negative regulation of cell population proliferation]
GO:0016573 [histone acetylation]
GO:0035064 [methylated histone binding]
GO:0043065 [positive regulation of apoptotic process]
GO:0043966 [histone H3 acetylation]
GO:0043981 [histone H4-K5 acetylation]
GO:0043982 [histone H4-K8 acetylation]
GO:0043983 [histone H4-K12 acetylation]
GO:0045111 [intermediate filament cytoskeleton]
GO:0045892 [negative regulation of transcription, DNA-templated]
GO:0045893 [positive regulation of transcription, DNA-templated]
GO:0045926 [negative regulation of growth]
GO:0046872 [metal ion binding]
GO:0070776 [MOZ/MORF histone acetyltransferase complex]
Show all
179 aa
20.5 kDa
No 0
ING4-206
ENSP00000397343
ENST00000444704
Q9UNL4 [Direct mapping]
Inhibitor of growth protein 4
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000123 [histone acetyltransferase complex]
GO:0003713 [transcription coactivator activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005829 [cytosol]
GO:0006260 [DNA replication]
GO:0006325 [chromatin organization]
GO:0006473 [protein acetylation]
GO:0006915 [apoptotic process]
GO:0006978 [DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator]
GO:0007049 [cell cycle]
GO:0007050 [cell cycle arrest]
GO:0008285 [negative regulation of cell population proliferation]
GO:0016573 [histone acetylation]
GO:0035064 [methylated histone binding]
GO:0043065 [positive regulation of apoptotic process]
GO:0043966 [histone H3 acetylation]
GO:0043981 [histone H4-K5 acetylation]
GO:0043982 [histone H4-K8 acetylation]
GO:0043983 [histone H4-K12 acetylation]
GO:0045111 [intermediate filament cytoskeleton]
GO:0045892 [negative regulation of transcription, DNA-templated]
GO:0045893 [positive regulation of transcription, DNA-templated]
GO:0045926 [negative regulation of growth]
GO:0046872 [metal ion binding]
GO:0070776 [MOZ/MORF histone acetyltransferase complex]
Show all
225 aa
25.6 kDa
No 0
ING4-207
ENSP00000415903
ENST00000446105
Q9UNL4 [Direct mapping]
Inhibitor of growth protein 4
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000123 [histone acetyltransferase complex]
GO:0003713 [transcription coactivator activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005829 [cytosol]
GO:0006260 [DNA replication]
GO:0006325 [chromatin organization]
GO:0006473 [protein acetylation]
GO:0006915 [apoptotic process]
GO:0006978 [DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator]
GO:0007049 [cell cycle]
GO:0007050 [cell cycle arrest]
GO:0008285 [negative regulation of cell population proliferation]
GO:0016573 [histone acetylation]
GO:0035064 [methylated histone binding]
GO:0043065 [positive regulation of apoptotic process]
GO:0043966 [histone H3 acetylation]
GO:0043981 [histone H4-K5 acetylation]
GO:0043982 [histone H4-K8 acetylation]
GO:0043983 [histone H4-K12 acetylation]
GO:0045111 [intermediate filament cytoskeleton]
GO:0045892 [negative regulation of transcription, DNA-templated]
GO:0045893 [positive regulation of transcription, DNA-templated]
GO:0045926 [negative regulation of growth]
GO:0046872 [metal ion binding]
GO:0070776 [MOZ/MORF histone acetyltransferase complex]
Show all
245 aa
28.1 kDa
No 0
ING4-208
ENSP00000473635
ENST00000467678
R4GNG1 [Direct mapping]
Inhibitor of growth protein 4
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005634 [nucleus]
GO:0008285 [negative regulation of cell population proliferation]
GO:0016573 [histone acetylation]
GO:0035064 [methylated histone binding]
GO:0043065 [positive regulation of apoptotic process]
GO:0070776 [MOZ/MORF histone acetyltransferase complex]
Show all
51 aa
5.7 kDa
No 0
ING4-217
ENSP00000437198
ENST00000493873
E9PNE3 [Direct mapping]
Inhibitor of growth protein 4
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
21 aa
2.2 kDa
No 0
ING4-218
ENSP00000480978
ENST00000619641
A4KYM5 [Direct mapping]
Inhibitor of growth family member 4 variant deltaEx3; Inhibitor of growth protein 4
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005634 [nucleus]
GO:0008285 [negative regulation of cell population proliferation]
GO:0016573 [histone acetylation]
GO:0035064 [methylated histone binding]
GO:0043065 [positive regulation of apoptotic process]
GO:0070776 [MOZ/MORF histone acetyltransferase complex]
Show all
51 aa
5.8 kDa
No 0

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The Human Protein Atlas project is funded
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