We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
TPI1
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • TPI1
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:442.0 nTPM
FANTOM5:67.7 Scaled Tags Per Million
Pig:274.1 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA050924Antibody HPA053568
Glial cells MediumNot detected
Neuronal cells LowLow



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 442.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 442.0
Samples: 246

Max nTPM: 955.8
Min nTPM: 220.3
Std nTPM: 112.7
Median nTPM: 427.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 955.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 823.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 760.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 749.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 749.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 716.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 703.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 690.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 685.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 684.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 681.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 675.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 658.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 653.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 645.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 633.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 629.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 612.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 612.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 612.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 609.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 606.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 602.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 595.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 587.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 581.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 581.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 578.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 575.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 568.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 565.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 562.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 560.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 557.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 555.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 555.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 551.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 543.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 543.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 539.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 538.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 537.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 535.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 533.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 530.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 526.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 525.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 524.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 520.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 519.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 518.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 515.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 514.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 512.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 509.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 508.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 507.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 506.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 501.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 501.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 500.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 499.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 498.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 498.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 498.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 496.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 494.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 491.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 490.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 489.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 482.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 481.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 481.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 480.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 479.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 478.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 477.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 477.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 474.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 474.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 473.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 472.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 471.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 470.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 469.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 466.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 466.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 463.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 463.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 462.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 462.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 461.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 461.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 461.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 460.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 459.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 458.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 457.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 456.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 454.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 452.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 452.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 451.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 450.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 449.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 449.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 447.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 447.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 447.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 447.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 445.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 445.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 442.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 437.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 435.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 433.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 433.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 432.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 432.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 430.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 428.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 428.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 427.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 427.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 427.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 425.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 423.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 420.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 420.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 419.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 418.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 416.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 415.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 413.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 411.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 410.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 409.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 405.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 405.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 404.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 403.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 403.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 402.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 402.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 400.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 399.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 398.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 397.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 396.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 395.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 395.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 394.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 393.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 391.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 391.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 391.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 390.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 390.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 388.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 386.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 384.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 383.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 383.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 382.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 382.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 382.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 380.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 380.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 379.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 379.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 379.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 379.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 377.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 377.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 376.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 374.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 371.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 371.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 370.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 369.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 368.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 367.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 366.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 365.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 364.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 363.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 363.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 362.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 361.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 360.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 357.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 356.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 355.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 354.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 354.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 354.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 351.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 350.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 349.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 349.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 349.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 348.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 347.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 347.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 347.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 344.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 344.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 342.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 342.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 336.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 335.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 333.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 333.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 329.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 329.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 329.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 328.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 327.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 327.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 326.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 325.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 323.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 323.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 323.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 320.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 318.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 318.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 316.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 314.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 307.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 303.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 285.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 285.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 282.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 277.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 274.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 268.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 267.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 259.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 255.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 248.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 239.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 237.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 232.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 226.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 220.3
Show allShow less

CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 67.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 67.7
FF:10164-103B2 76 years, female 67.7

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 274.1
Pig sample Sample description nTPM
Caudate
nTPM: 274.1
Samples: 4

Max nTPM: 345.2
Min nTPM: 214.4
Sample A Female 214.4
Sample B Female 287.3
Sample C Male 345.2
Sample D Male 249.4

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.