HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Mouse brain, Intensity
Hippocampal formationi 		122.951
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:295.0 nTPM
HPA:295.0 nTPM
GTEx:220.9 nTPM
FANTOM5:176.7 Scaled Tags Per Million
Pig:227.1 nTPM
Mouse:729.4 nTPM
Allen mouse:25.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB000063Antibody CAB073539
Glial cells HighNot detected
Neuronal cells HighMedium




HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody CAB079023
Hippocampal formation mean intensity 122.951
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 82.999
Molecular layer of the dentate gyrus 102.370
Granular dentate gyrus 45.683
CA1 - oriens layer 105.306
CA1 - pyramidal layer 85.124
CA1 - radiatum layer 105.667
CA2 - oriens layer 102.770
CA2 - pyramidal layer 65.875
CA2 - radiatum layer 94.534
CA3 - oriens layer 86.154
CA3 - pyramidal layer 57.581
CA3 - radiatum layer 85.590
Stratum lucidum 67.818
Lacunosum moleculare 78.093
Subiculum 64.611

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 295.0
Sample id Sample description nTPM
Hippocampus
nTPM: 167.5
1898 Male, age 80, left hemisphere 241.3
2621 Female, age 67, right hemisphere 179.7
2148 Female, age 91, left hemisphere 157.1
1855 Male, age 76, left hemisphere 153.2
2529 Female, age 94, left hemisphere 138.1
1911 Female, age 85, right hemisphere 135.7
Dentate gyrus
nTPM: 194.0
1927 Female, age 91, both hemispheres 232.6
2530 Female, age 94, left hemisphere 201.1
2010 Male, age 76, both hemispheres 189.5
2528 Male, age 74, both hemispheres 187.8
2531 Female, age 67, both hemispheres 178.8
2246 Female, age 85, both hemispheres 174.1
Entorhinal gyrus
nTPM: 230.4
2764 Male, age 80, right hemisphere 310.1
2613 Female, age 94, left hemisphere 273.7
1938 Female, age 85, left hemisphere 235.8
1787 Male, age 76, left hemisphere 208.9
2686 Male, age 75, right hemisphere 198.9
2117 Female, age 91, right hemisphere 155.3
Hippocampus, CA1
nTPM: 202.6
2749 Male, age 80, left hemisphere 293.5
2082 Female, age 91, right hemisphere 195.4
1873 Female, age 85, both hemispheres 182.5
2045 Male, age 76, both hemispheres 178.2
2527 Male, age 74, both hemispheres 163.5
Hippocampus, CA2
nTPM: 202.2
1892 Male, age 76, both hemispheres 256.5
2437 Female, age 94, left hemisphere 205.9
1963 Male, age 80, left hemisphere 205.2
1940 Female, age 85, left hemisphere 192.1
2249 Male, age 74, both hemispheres 177.9
2113 Female, age 91, right hemisphere 175.4
Hippocampus, CA3
nTPM: 199.8
2620 Female, age 94, left hemisphere 244.4
2137 Male, age 80, left hemisphere 226.0
1867 Male, age 76, both hemispheres 219.4
2436 Male, age 74, both hemispheres 180.9
1891 Female, age 85, both hemispheres 168.7
2861 Female, age 67, both hemispheres 159.4
Parahippocampal cortex
nTPM: 230.7
1850 Male, age 80, both hemispheres 307.4
1990 Female, age 91, right hemisphere 264.6
2245 Female, age 91, both hemispheres 248.1
2693 Female, age 94, both hemispheres 238.6
1933 Female, age 85, both hemispheres 234.2
2532 Female, age 72, left hemisphere 232.3
2250 Female, age 67, right hemisphere 223.1
2018 Male, age 76, both hemispheres 199.5
2622 Female, age 67, right hemisphere 193.3
2692 Male, age 74, both hemispheres 165.7
Perirhinal gyrus
nTPM: 295.0
1847 Female, age 91, left hemisphere 359.5
1794 Male, age 80, right hemisphere 345.4
1841 Female, age 85, right hemisphere 288.8
2521 Female, age 94, right hemisphere 252.8
2848 Male, age 76, right hemisphere 228.6
Subiculum
nTPM: 176.3
1977 Female, age 85, both hemispheres 235.1
1901 Male, age 80, both hemispheres 199.7
2619 Male, age 74, both hemispheres 177.5
2438 Female, age 94, left hemisphere 168.7
2042 Male, age 76, both hemispheres 139.0
2729 Female, age 91, right hemisphere 137.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 220.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 220.9
Samples: 197

Max nTPM: 600.7
Min nTPM: 73.6
Std nTPM: 112.1
Median nTPM: 185.3
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 600.7
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 532.8
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 530.4
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 519.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 496.7
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 495.8
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 493.6
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 477.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 475.3
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 461.5
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 433.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 176.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 176.7
FF:10169-103B7 60 years, female 199.8
FF:10153-102I9 76 years, female 153.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 227.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 214.7
Samples: 4

Max nTPM: 254.2
Min nTPM: 176.3
Sample A Female 254.2
Sample B Female 230.1
Sample C Male 198.1
Sample D Male 176.3
Entorhinal cortex
nTPM: 227.1
Samples: 4

Max nTPM: 241.8
Min nTPM: 196.7
Sample A Female 241.6
Sample B Female 241.8
Sample C Male 228.2
Sample D Male 196.7
Subiculum
nTPM: 188.2
Samples: 4

Max nTPM: 244.7
Min nTPM: 154.9
Sample A Female 244.7
Sample B Female 166.1
Sample C Male 186.9
Sample D Male 154.9
Ventral hippocampus
nTPM: 215.5
Samples: 4

Max nTPM: 283.7
Min nTPM: 141.3
Sample A Female 223.7
Sample B Female 141.3
Sample C Male 283.7
Sample D Male 213.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 729.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 683.5
Samples: 4

Max nTPM: 723.8
Min nTPM: 668.1
Sample A Male 669.7
Sample B Male 672.5
Sample C Female 668.1
Sample D Female 723.8
Hippocampal formation
nTPM: 729.4
Samples: 4

Max nTPM: 786.3
Min nTPM: 698.8
Sample A Male 698.8
Sample B Male 705.6
Sample C Female 786.3
Sample D Female 726.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 25.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 25.9
112197625 Antisense, RP_110421_01_F07, Mouse strain C57BL/6J (56 days, male) 27.7
79360272 Antisense, RP_071018_01_G01, Mouse strain C57BL/6J (56 days, male) 24.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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