HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:66.8 nTPM
HPA:66.8 nTPM
GTEx:97.9 nTPM
FANTOM5:184.6 Scaled Tags Per Million
Pig:123.5 nTPM
Mouse:43.9 nTPM
Allen mouse:14.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA031619
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 66.8
Sample id Sample description nTPM
Hippocampus
nTPM: 62.2
2621 Female, age 67, right hemisphere 81.8
2529 Female, age 94, left hemisphere 76.0
2148 Female, age 91, left hemisphere 73.2
1855 Male, age 76, left hemisphere 55.0
1911 Female, age 85, right hemisphere 45.2
1898 Male, age 80, left hemisphere 42.0
Dentate gyrus
nTPM: 57.4
2531 Female, age 67, both hemispheres 84.2
2530 Female, age 94, left hemisphere 66.0
2246 Female, age 85, both hemispheres 60.1
2528 Male, age 74, both hemispheres 54.1
2010 Male, age 76, both hemispheres 42.8
1927 Female, age 91, both hemispheres 37.3
Entorhinal gyrus
nTPM: 66.8
2686 Male, age 75, right hemisphere 90.7
2613 Female, age 94, left hemisphere 74.7
2764 Male, age 80, right hemisphere 62.5
2117 Female, age 91, right hemisphere 59.2
1787 Male, age 76, left hemisphere 57.3
1938 Female, age 85, left hemisphere 56.1
Hippocampus, CA1
nTPM: 46.2
2527 Male, age 74, both hemispheres 63.2
2045 Male, age 76, both hemispheres 47.6
1873 Female, age 85, both hemispheres 45.9
2082 Female, age 91, right hemisphere 44.6
2749 Male, age 80, left hemisphere 29.5
Hippocampus, CA2
nTPM: 41.1
2437 Female, age 94, left hemisphere 56.1
2113 Female, age 91, right hemisphere 46.5
1940 Female, age 85, left hemisphere 44.7
2249 Male, age 74, both hemispheres 39.9
1892 Male, age 76, both hemispheres 34.2
1963 Male, age 80, left hemisphere 25.4
Hippocampus, CA3
nTPM: 60.5
2861 Female, age 67, both hemispheres 111.0
2620 Female, age 94, left hemisphere 94.9
2137 Male, age 80, left hemisphere 43.3
1891 Female, age 85, both hemispheres 42.3
2436 Male, age 74, both hemispheres 37.6
1867 Male, age 76, both hemispheres 33.8
Parahippocampal cortex
nTPM: 64.1
2622 Female, age 67, right hemisphere 99.8
2245 Female, age 91, both hemispheres 84.6
2692 Male, age 74, both hemispheres 82.9
2532 Female, age 72, left hemisphere 76.2
2693 Female, age 94, both hemispheres 58.0
2250 Female, age 67, right hemisphere 57.4
1850 Male, age 80, both hemispheres 49.1
1933 Female, age 85, both hemispheres 47.0
1990 Female, age 91, right hemisphere 44.9
2018 Male, age 76, both hemispheres 40.8
Perirhinal gyrus
nTPM: 51.1
2848 Male, age 76, right hemisphere 64.3
1794 Male, age 80, right hemisphere 55.0
2521 Female, age 94, right hemisphere 49.7
1841 Female, age 85, right hemisphere 48.4
1847 Female, age 91, left hemisphere 38.1
Subiculum
nTPM: 52.9
2619 Male, age 74, both hemispheres 78.1
2438 Female, age 94, left hemisphere 64.6
2729 Female, age 91, right hemisphere 47.7
2042 Male, age 76, both hemispheres 45.9
1901 Male, age 80, both hemispheres 41.0
1977 Female, age 85, both hemispheres 40.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 97.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 97.9
Samples: 197

Max nTPM: 195.8
Min nTPM: 48.0
Std nTPM: 23.4
Median nTPM: 93.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 195.8
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 184.5
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 166.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 159.5
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 157.0
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 154.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 152.9
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 149.1
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 148.8
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 143.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 140.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 184.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 184.6
FF:10153-102I9 76 years, female 204.0
FF:10169-103B7 60 years, female 165.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 123.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 78.4
Samples: 4

Max nTPM: 84.9
Min nTPM: 70.0
Sample A Female 80.9
Sample B Female 77.6
Sample C Male 84.9
Sample D Male 70.0
Entorhinal cortex
nTPM: 123.5
Samples: 4

Max nTPM: 134.8
Min nTPM: 97.9
Sample A Female 133.7
Sample B Female 97.9
Sample C Male 134.8
Sample D Male 127.5
Subiculum
nTPM: 103.9
Samples: 4

Max nTPM: 139.1
Min nTPM: 83.2
Sample A Female 139.1
Sample B Female 86.0
Sample C Male 107.2
Sample D Male 83.2
Ventral hippocampus
nTPM: 95.8
Samples: 4

Max nTPM: 137.9
Min nTPM: 73.2
Sample A Female 78.6
Sample B Female 73.2
Sample C Male 137.9
Sample D Male 93.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 43.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 43.9
Samples: 4

Max nTPM: 50.6
Min nTPM: 35.8
Sample A Male 45.3
Sample B Male 43.9
Sample C Female 35.8
Sample D Female 50.6
Hippocampal formation
nTPM: 36.5
Samples: 4

Max nTPM: 39.2
Min nTPM: 33.7
Sample A Male 35.4
Sample B Male 37.6
Sample C Female 33.7
Sample D Female 39.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.4
68911027 Antisense, RP_050203_02_G07, Mouse strain C57BL/6J (56 days, male) 14.4

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