HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:34.2 nTPM
HPA:34.2 nTPM
GTEx:28.5 nTPM
FANTOM5:68.4 Scaled Tags Per Million
Pig:20.2 nTPM
Mouse:78.1 nTPM
Allen mouse:6.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038308Antibody HPA038696
Glial cells MediumHigh
Neuronal cells MediumHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 34.2
Sample id Sample description nTPM
Hippocampus
nTPM: 27.8
1898 Male, age 80, left hemisphere 33.8
1855 Male, age 76, left hemisphere 28.2
1911 Female, age 85, right hemisphere 27.7
2621 Female, age 67, right hemisphere 26.6
2148 Female, age 91, left hemisphere 26.3
2529 Female, age 94, left hemisphere 24.4
Dentate gyrus
nTPM: 28.3
2010 Male, age 76, both hemispheres 32.9
2531 Female, age 67, both hemispheres 28.5
2246 Female, age 85, both hemispheres 28.2
2530 Female, age 94, left hemisphere 27.3
1927 Female, age 91, both hemispheres 27.1
2528 Male, age 74, both hemispheres 25.7
Entorhinal gyrus
nTPM: 26.6
1938 Female, age 85, left hemisphere 29.3
2764 Male, age 80, right hemisphere 28.7
2686 Male, age 75, right hemisphere 26.7
1787 Male, age 76, left hemisphere 25.3
2117 Female, age 91, right hemisphere 25.2
2613 Female, age 94, left hemisphere 24.4
Hippocampus, CA1
nTPM: 28.6
2749 Male, age 80, left hemisphere 31.6
1873 Female, age 85, both hemispheres 31.5
2045 Male, age 76, both hemispheres 28.5
2527 Male, age 74, both hemispheres 26.1
2082 Female, age 91, right hemisphere 25.4
Hippocampus, CA2
nTPM: 27.8
1963 Male, age 80, left hemisphere 30.9
1940 Female, age 85, left hemisphere 30.6
1892 Male, age 76, both hemispheres 29.1
2113 Female, age 91, right hemisphere 26.1
2249 Male, age 74, both hemispheres 26.0
2437 Female, age 94, left hemisphere 23.8
Hippocampus, CA3
nTPM: 26.8
2620 Female, age 94, left hemisphere 30.6
2137 Male, age 80, left hemisphere 28.6
1867 Male, age 76, both hemispheres 27.1
1891 Female, age 85, both hemispheres 27.1
2436 Male, age 74, both hemispheres 25.4
2861 Female, age 67, both hemispheres 22.0
Parahippocampal cortex
nTPM: 29.3
1850 Male, age 80, both hemispheres 36.8
2693 Female, age 94, both hemispheres 32.5
2018 Male, age 76, both hemispheres 32.3
1933 Female, age 85, both hemispheres 32.2
2532 Female, age 72, left hemisphere 30.2
2245 Female, age 91, both hemispheres 27.2
2250 Female, age 67, right hemisphere 26.9
1990 Female, age 91, right hemisphere 26.2
2692 Male, age 74, both hemispheres 24.2
2622 Female, age 67, right hemisphere 24.0
Perirhinal gyrus
nTPM: 34.2
1841 Female, age 85, right hemisphere 40.3
1794 Male, age 80, right hemisphere 35.6
2521 Female, age 94, right hemisphere 33.8
2848 Male, age 76, right hemisphere 32.1
1847 Female, age 91, left hemisphere 29.3
Subiculum
nTPM: 26.2
1977 Female, age 85, both hemispheres 30.2
2042 Male, age 76, both hemispheres 27.5
1901 Male, age 80, both hemispheres 27.0
2729 Female, age 91, right hemisphere 25.5
2438 Female, age 94, left hemisphere 24.9
2619 Male, age 74, both hemispheres 22.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.5
Samples: 197

Max nTPM: 85.8
Min nTPM: 17.5
Std nTPM: 7.3
Median nTPM: 26.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 85.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 52.8
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 49.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 46.3
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 43.9
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 43.7
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 40.3
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 40.0
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 40.0
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 39.9
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 39.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 68.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 68.4
FF:10169-103B7 60 years, female 81.6
FF:10153-102I9 76 years, female 55.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 20.3
Samples: 4

Max nTPM: 24.7
Min nTPM: 15.1
Sample A Female 24.7
Sample B Female 22.7
Sample C Male 15.1
Sample D Male 18.5
Entorhinal cortex
nTPM: 13.2
Samples: 4

Max nTPM: 14.9
Min nTPM: 12.2
Sample A Female 12.5
Sample B Female 14.9
Sample C Male 13.0
Sample D Male 12.2
Subiculum
nTPM: 12.0
Samples: 4

Max nTPM: 14.3
Min nTPM: 10.9
Sample A Female 14.3
Sample B Female 10.9
Sample C Male 11.3
Sample D Male 11.5
Ventral hippocampus
nTPM: 16.6
Samples: 4

Max nTPM: 21.0
Min nTPM: 12.1
Sample A Female 19.2
Sample B Female 14.0
Sample C Male 12.1
Sample D Male 21.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 78.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 69.9
Samples: 4

Max nTPM: 76.4
Min nTPM: 60.1
Sample A Male 70.2
Sample B Male 76.4
Sample C Female 72.7
Sample D Female 60.1
Hippocampal formation
nTPM: 78.2
Samples: 4

Max nTPM: 86.6
Min nTPM: 73.6
Sample A Male 86.6
Sample B Male 75.7
Sample C Female 76.7
Sample D Female 73.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.3
70743887 Antisense, RP_050725_01_H11, Mouse strain C57BL/6J (56 days, male) 7.2
67765725 Antisense, RP_040916_01_F10, Mouse strain C57BL/6J (56 days, male) 5.5

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The Human Protein Atlas

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