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RWDD1
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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:45.0 nTPM
HPA:45.0 nTPM
GTEx:43.1 nTPM
FANTOM5:108.7 Scaled Tags Per Million
Pig:20.1 nTPM
Mouse:74.9 nTPM
Allen mouse:0.3 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA028712Antibody HPA028713
Glial cells MediumNot detected
Neuronal cells MediumNot detected





BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 45.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 38.7
2481 Female, age 94, left hemisphere 42.5
2288 Male, age 75, left hemisphere 41.1
2846 Female, age 79, unknown 40.8
1857 Female, age 85, left hemisphere 38.7
2290 Female, age 72, unknown 37.5
1854 Male, age 80, left hemisphere 37.3
1781 Male, age 74, unknown 36.0
2289 Male, age 61, right hemisphere 35.3
Claustrum
nTPM: 37.6
1956 Male, age 74, unknown 41.0
2491 Male, age 75, both hemispheres 40.6
2392 Female, age 94, both hemispheres 40.3
2292 Female, age 85, both hemispheres 39.4
2198 Male, age 80, both hemispheres 37.9
2196 Female, age 79, unknown 37.4
2284 Female, age 91, both hemispheres 34.7
2568 Male, age 61, both hemispheres 33.8
2645 Female, age 72, unknown 33.5
Globus pallidus, externus
nTPM: 42.8
2395 Male, age 75, both hemispheres 47.0
2772 Female, age 79, unknown 46.1
1996 Male, age 80, right hemisphere 45.4
2567 Female, age 72, unknown 39.4
2646 Male, age 61, right hemisphere 36.1
Globus pallidus, internus
nTPM: 45.0
2287 Male, age 75, right hemisphere 49.5
2483 Female, age 94, right hemisphere 45.9
2778 Female, age 91, both hemispheres 45.4
1818 Male, age 74, unknown 45.1
2111 Female, age 85, right hemisphere 44.8
2037 Male, age 80, right hemisphere 43.9
2566 Female, age 72, unknown 40.7
Nucleus accumbens
nTPM: 39.1
2391 Female, age 94, left hemisphere 44.0
2286 Male, age 75, left hemisphere 41.3
2698 Female, age 72, unknown 40.3
1856 Female, age 91, right hemisphere 39.5
1806 Female, age 85, left hemisphere 38.1
2824 Male, age 61, right hemisphere 37.7
1783 Male, age 74, unknown 36.5
2732 Male, age 80, right hemisphere 35.8
Nucleus basalis of Meynert
nTPM: 38.7
2821 Male, age 75, both hemispheres 40.8
2393 Male, age 80, right hemisphere 39.5
2484 Female, age 94, left hemisphere 38.5
2569 Male, age 61, both hemispheres 36.1
Nucleus of the diagonal band
nTPM: 37.3
1812 Female, age 91, both hemispheres 42.9
2775 Male, age 80, right hemisphere 37.0
2029 Male, age 61, right hemisphere 36.1
1979 Male, age 74, unknown 35.6
2195 Female, age 85, both hemispheres 34.8
Olfactory tubercle
nTPM: 35.7
1846 Male, age 80, right hemisphere 36.9
1998 Female, age 91, both hemispheres 36.8
2856 Male, age 75, right hemisphere 35.7
2487 Female, age 94, left hemisphere 33.3
Putamen
nTPM: 39.1
1829 Male, age 74, unknown 40.9
1838 Male, age 80, right hemisphere 40.3
1937 Female, age 91, right hemisphere 40.2
2482 Female, age 94, left hemisphere 39.4
2466 Female, age 79, unknown 38.7
2647 Male, age 75, left hemisphere 37.6
2489 Female, age 72, unknown 36.4
Septal nuclei
nTPM: 36.2
2009 Female, age 91, both hemispheres 39.0
2031 Female, age 72, unknown 38.9
2199 Male, age 80, right hemisphere 35.8
2629 Female, age 94, right hemisphere 35.7
2394 Male, age 61, left hemisphere 35.5
1960 Male, age 74, unknown 35.3
2059 Female, age 85, both hemispheres 33.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Max average nTPM 43.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 38.0
Samples: 246

Max nTPM: 89.3
Min nTPM: 23.2
Std nTPM: 9.4
Median nTPM: 36.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 89.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 88.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 74.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 74.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 69.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 65.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 62.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 57.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 57.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 56.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 55.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 55.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 54.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 54.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 54.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 53.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 51.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 50.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 50.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 49.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 49.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 49.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 49.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 48.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 47.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 47.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 46.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 46.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 46.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 45.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 45.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 45.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 45.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 45.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 44.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 44.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 44.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 44.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 44.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 44.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 44.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 44.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 44.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 43.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 43.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 43.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 43.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 43.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 43.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 43.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 43.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 43.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 43.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 43.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 42.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 42.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 42.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 42.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 42.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 42.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 41.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 41.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 41.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 41.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 41.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 41.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 41.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 41.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 41.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 41.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 41.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 40.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 40.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 40.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 40.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 40.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 40.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 40.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 40.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 39.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 39.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 39.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 39.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 39.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 39.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 39.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 39.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 39.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 39.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 39.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 39.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 39.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 39.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 39.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 38.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 38.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 38.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 38.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 38.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 38.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 38.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 38.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 38.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 38.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 38.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 38.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 37.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 37.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 37.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 37.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 37.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 37.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 37.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 37.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 36.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 36.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 36.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 36.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 36.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 36.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 36.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 36.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 36.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 36.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 36.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 36.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 36.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 35.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 35.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 35.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 35.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 35.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 35.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 35.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 35.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 35.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 35.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 35.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 34.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 34.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 34.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 34.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 34.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 34.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 34.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 34.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 34.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 34.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 34.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 33.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 33.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 33.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 33.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 33.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 33.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 33.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 33.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 33.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 33.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 33.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 33.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 33.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 33.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 33.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 33.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 33.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 33.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 33.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 33.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 33.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 33.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 33.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 32.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 32.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 32.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 32.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 32.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 32.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 32.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 32.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 32.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 32.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 32.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 32.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 32.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 32.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 32.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 31.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 31.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 31.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 31.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 31.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 31.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 31.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 31.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 31.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 31.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 31.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 31.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 31.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 31.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 31.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 31.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 30.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 30.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 30.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 30.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 30.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 30.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 30.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 30.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 30.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 29.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 29.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 29.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 29.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 29.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 29.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 29.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 28.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 28.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 28.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 28.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 28.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 28.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 28.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 27.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 27.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 27.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 27.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 27.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 27.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 27.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 27.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 27.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 27.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 27.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 27.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 26.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 26.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 26.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 25.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 24.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 24.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 23.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 23.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 36.4
Samples: 246

Max nTPM: 94.0
Min nTPM: 17.4
Std nTPM: 9.9
Median nTPM: 34.2
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 94.0
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 83.2
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 80.5
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 67.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 64.4
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 61.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 60.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 59.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 57.9
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 55.0
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 54.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 53.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 52.5
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 52.4
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 51.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 50.8
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 50.7
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 50.4
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 49.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 49.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 48.7
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 48.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 48.4
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 48.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 48.1
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 47.9
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 47.6
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 47.5
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 47.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 47.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 46.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 46.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 46.8
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 45.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 44.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 44.7
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 44.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 44.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 43.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 43.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 43.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 43.4
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 43.2
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 43.1
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 43.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 42.8
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 42.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 42.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 42.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 41.8
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 41.8
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 41.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 41.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 41.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 41.2
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 41.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 41.1
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 41.0
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 40.9
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 40.9
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 40.8
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 40.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 40.7
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 40.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 40.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 40.3
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 40.2
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 40.2
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 40.2
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 39.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 39.7
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 39.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 39.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 39.3
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 39.3
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 39.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 39.0
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 39.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 38.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 38.8
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 38.7
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 38.3
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 38.2
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 38.2
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 37.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 37.8
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 37.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 37.6
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 37.5
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 37.4
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 37.4
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 37.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 37.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 37.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 36.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 36.5
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 36.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 36.5
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 36.4
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 36.4
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 36.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 36.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 36.3
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 36.2
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 36.1
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 36.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 36.0
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 35.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 35.7
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 35.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 35.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 35.3
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 35.3
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 35.2
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 35.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 34.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 34.7
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 34.4
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 34.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 34.3
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 34.3
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 34.2
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 34.2
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 34.2
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 34.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 33.7
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 33.6
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 33.4
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 33.4
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 33.4
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 33.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 33.1
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 33.0
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 33.0
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 33.0
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 32.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 32.9
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 32.9
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 32.8
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 32.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 32.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 32.5
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 32.5
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 32.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 32.5
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 32.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 32.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 32.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 32.4
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 32.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 32.3
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 32.3
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 32.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 32.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 32.2
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 32.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 32.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 31.8
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 31.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 31.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 31.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 31.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 31.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 31.5
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 31.4
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 31.4
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 31.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 31.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 31.4
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 31.3
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 31.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 31.1
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 30.9
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 30.9
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 30.8
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 30.8
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 30.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 30.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 30.7
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 30.6
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 30.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 30.4
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 30.3
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 30.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 30.2
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 30.0
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 30.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 29.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 29.8
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 29.8
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 29.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 29.5
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 29.4
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 29.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 29.3
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 29.2
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 29.2
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 29.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 29.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 29.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 28.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 28.8
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 28.7
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 28.7
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 28.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 28.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 28.6
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 28.6
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 28.5
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 28.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 28.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 28.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 27.8
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 27.7
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 27.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 27.5
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 27.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 27.4
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 27.3
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 27.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 27.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 26.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 26.8
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 26.5
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 26.2
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 26.1
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 25.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 25.7
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 25.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 25.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 25.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 25.2
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 25.2
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 25.1
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 24.8
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 24.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 24.6
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 24.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 24.0
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 23.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 22.3
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 22.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 21.7
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 21.4
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 20.6
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 17.4
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Brain - Putamen (basal ganglia)
Average nTPM: 43.1
Samples: 205

Max nTPM: 102.4
Min nTPM: 24.7
Std nTPM: 10.2
Median nTPM: 41.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 102.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 81.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 80.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 75.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 71.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 69.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 69.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 67.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 65.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 64.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 63.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 62.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 60.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 60.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 58.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 57.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 57.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 56.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 55.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 55.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 53.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 53.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 52.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 51.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 51.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 51.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 51.1
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 50.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 50.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 50.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 50.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 50.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 50.1
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 49.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 49.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 49.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 49.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 49.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 48.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 48.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 48.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 48.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 48.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 48.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 47.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 47.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 47.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 47.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 47.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 47.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 47.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 46.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 46.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 46.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 46.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 46.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 46.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 46.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 45.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 45.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 45.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 45.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 45.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 45.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 45.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 45.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 45.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 44.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 44.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 44.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 44.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 44.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 44.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 44.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 44.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 44.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 43.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 43.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 43.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 43.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 43.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 43.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 43.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 43.2
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 43.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 43.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 43.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 42.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 42.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 42.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 42.2
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 42.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 42.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 42.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 42.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 41.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 41.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 41.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 41.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 41.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 41.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 41.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 41.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 41.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 41.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 41.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 40.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 40.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 40.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 40.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 40.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 40.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 40.5
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 40.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 40.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 40.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 39.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 39.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 39.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 39.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 39.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 39.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 39.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 39.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 39.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 39.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 39.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 39.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 39.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 39.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 38.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 38.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 38.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 38.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 38.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 38.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 38.3
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 38.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 38.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 38.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 38.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 38.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 37.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 37.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 37.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 37.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 37.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 37.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 37.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 37.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 37.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 37.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 37.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 37.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 37.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 37.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 36.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 36.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 36.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 36.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 36.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 36.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 36.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 35.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 35.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 35.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 35.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 35.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 35.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 35.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 35.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 35.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 35.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 34.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 34.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 34.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 34.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 34.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 33.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 33.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 33.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 33.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 33.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 32.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 32.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 32.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 31.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 31.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 31.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 31.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 31.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 31.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 31.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 30.9
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 30.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 30.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 30.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 29.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 29.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 29.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 28.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 28.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 28.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 27.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 24.7
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

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Max Scaled Tags Per Million 108.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 69.1
FF:10164-103B2 76 years, female 69.1
Globus pallidus
Scaled Tags Per Million: 108.7
FF:10175-103C4 60 years, female 117.6
FF:10161-103A8 76 years, female 99.9
Nucleus accumbens
Scaled Tags Per Million: 66.8
FF:10037-101F1 23-56 years, mixed 66.8
Putamen
Scaled Tags Per Million: 76.1
FF:10176-103C5 60 years, female 76.1

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 20.1
Pig sample Sample description nTPM
Caudate
nTPM: 15.3
Samples: 4

Max nTPM: 16.3
Min nTPM: 14.1
Sample A Female 15.1
Sample B Female 14.1
Sample C Male 16.3
Sample D Male 15.6
Putamen
nTPM: 20.1
Samples: 4

Max nTPM: 23.5
Min nTPM: 17.6
Sample A Female 19.7
Sample B Female 17.6
Sample C Male 23.5
Sample D Male 19.6
Septum
nTPM: 17.1
Samples: 4

Max nTPM: 18.1
Min nTPM: 16.2
Sample A Female 16.7
Sample B Female 16.2
Sample C Male 17.4
Sample D Male 18.1
Ventral pallidum
nTPM: 16.1
Samples: 4

Max nTPM: 17.0
Min nTPM: 15.6
Sample A Female 15.6
Sample B Female 17.0
Sample C Male 15.7
Sample D Male 15.9

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 74.9
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 71.7
Samples: 4

Max nTPM: 75.9
Min nTPM: 68.9
Sample A Male 68.9
Sample B Male 75.9
Sample C Female 71.8
Sample D Female 70.3
Septum
nTPM: 74.9
Samples: 4

Max nTPM: 79.4
Min nTPM: 67.4
Sample A Male 67.4
Sample B Male 79.4
Sample C Female 76.5
Sample D Female 76.3
Ventral forebrain
nTPM: 73.8
Samples: 4

Max nTPM: 76.4
Min nTPM: 70.2
Sample A Male 76.4
Sample B Male 70.2
Sample C Female 76.1
Sample D Female 72.3

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

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Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.3
72000624 Antisense, RP_050915_02_D03, Mouse strain C57BL/6J (56 days, male) 0.3
Pallidum
Expression energy: 0.2
72000624 Antisense, RP_050915_02_D03, Mouse strain C57BL/6J (56 days, male) 0.2

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