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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:211.1 nTPM
FANTOM5:536.8 Scaled Tags Per Million
Pig:164.2 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA035738Antibody HPA035739
Glial cells LowLow
Neuronal cells HighNot detected




CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 211.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 211.1
Samples: 246

Max nTPM: 444.8
Min nTPM: 122.6
Std nTPM: 46.0
Median nTPM: 204.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 444.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 370.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 346.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 344.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 332.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 326.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 325.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 315.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 308.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 308.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 306.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 306.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 302.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 296.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 286.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 285.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 278.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 278.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 277.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 277.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 277.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 275.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 275.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 274.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 273.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 270.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 269.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 265.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 264.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 262.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 261.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 258.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 256.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 256.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 256.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 251.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 250.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 249.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 249.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 249.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 248.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 247.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 247.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 247.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 246.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 244.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 244.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 244.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 243.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 243.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 241.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 241.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 240.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 239.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 239.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 239.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 239.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 238.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 237.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 237.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 237.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 235.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 235.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 234.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 233.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 232.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 230.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 229.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 228.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 228.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 228.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 227.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 227.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 225.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 224.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 223.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 223.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 223.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 222.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 222.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 221.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 221.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 221.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 221.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 220.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 219.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 219.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 218.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 218.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 217.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 217.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 217.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 217.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 216.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 215.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 215.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 215.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 214.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 214.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 214.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 213.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 213.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 213.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 213.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 213.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 212.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 212.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 211.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 211.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 211.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 210.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 210.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 209.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 208.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 207.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 207.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 207.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 206.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 206.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 206.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 205.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 204.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 204.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 204.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 204.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 203.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 203.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 202.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 202.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 201.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 200.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 200.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 200.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 200.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 200.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 199.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 199.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 199.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 198.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 197.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 196.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 196.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 196.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 195.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 195.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 194.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 194.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 194.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 193.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 192.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 192.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 192.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 192.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 191.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 191.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 190.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 190.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 190.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 189.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 189.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 189.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 188.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 188.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 187.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 187.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 187.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 186.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 186.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 185.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 184.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 184.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 184.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 184.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 183.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 183.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 182.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 182.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 182.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 181.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 181.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 181.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 180.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 180.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 180.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 180.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 179.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 178.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 177.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 177.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 177.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 176.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 176.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 175.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 175.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 175.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 175.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 174.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 173.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 173.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 173.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 173.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 172.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 172.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 171.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 171.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 170.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 170.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 169.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 169.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 169.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 169.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 167.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 166.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 166.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 166.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 166.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 166.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 166.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 165.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 163.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 163.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 162.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 162.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 162.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 161.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 159.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 157.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 155.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 155.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 154.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 154.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 153.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 153.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 152.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 149.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 147.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 145.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 143.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 143.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 140.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 136.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 132.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 131.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 126.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 123.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 122.6
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 536.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 536.8
FF:10164-103B2 76 years, female 536.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 164.2
Pig sample Sample description nTPM
Caudate
nTPM: 164.2
Samples: 4

Max nTPM: 176.4
Min nTPM: 155.3
Sample A Female 161.4
Sample B Female 155.3
Sample C Male 176.4
Sample D Male 163.8

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