COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Not detected
Glandular cells: Not detected
Peripheral nerve/ganglion: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:107.9 nTPM
HPA:107.9 nTPM
GTEx:52.3 nTPM
FANTOM5:0.5 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA003281
Endothelial cells Not detected
Glandular cells Not detected
Peripheral nerve/ganglion Not detected

COLON - HPA RNA-seqi
Average nTPM 107.9
overview
Male, age 54 		Colon sample 67
nTPM: 83.8
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 77.1
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 122.8
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 148.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 125
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 101.9
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 100.3
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 81.8
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 69
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 155.8
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 109.4
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 98.8
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 128.4
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 52.3
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 35.7
Samples: 373

Max nTPM: 109.7
Min nTPM: 10.7
Std nTPM: 15.7
Median nTPM: 31.9
GTEX-1AMEY-1826-SM-72D5L 30-39 years, female 109.7
GTEX-139UW-2326-SM-5KM1Y 60-69 years, male 102.9
GTEX-1EU9M-2726-SM-7P8QD 60-69 years, male 96.4
GTEX-15UF6-2726-SM-7KULY 70-79 years, female 92.4
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 87.6
GTEX-ZYFD-2226-SM-5E43P 50-59 years, male 86.7
GTEX-1HSMO-2526-SM-A9SKP 60-69 years, male 86.3
GTEX-1R9PO-2026-SM-E9J4N 60-69 years, female 83.4
GTEX-1RDX4-1926-SM-E6CJJ 50-59 years, female 82.6
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 78.6
GTEX-1I1CD-2826-SM-A9SL4 60-69 years, female 78.6
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Colon - Transverse
Average nTPM: 52.3
Samples: 406

Max nTPM: 312.5
Min nTPM: 14.6
Std nTPM: 29.2
Median nTPM: 46.7
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 312.5
GTEX-14JIY-3326-SM-6871E 60-69 years, male 199.1
GTEX-11P82-1026-SM-5BC5J 20-29 years, male 187.2
GTEX-S4Q7-0826-SM-4AD5E 20-29 years, male 145.9
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 139.8
GTEX-14PK6-1726-SM-6871J 70-79 years, female 123.2
GTEX-QV31-0826-SM-CKZNC 30-39 years, male 118.8
GTEX-1IOXB-2626-SM-CJI2N 50-59 years, male 116.8
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 114.2
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 113.8
GTEX-1JN1M-2626-SM-CY8I3 60-69 years, female 113.5
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 0.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 0.5
FF:10014-101C5 62,83,84 years, mixed 0.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.