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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA055479
Pigment epithelial cells
Not detected
Photoreceptor cells
Medium
Limiting membrane
Not detected
Outer plexiform layer
Medium
Inner nuclear layer
Not detected
Inner plexiform layer
Not detected
Ganglion cells
Not detected
Nerve fiber layer
Not detected
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 883.3
Min nTPM: 155.0
Std nTPM: 143.5
Median nTPM:
218_1
71 years, female
883.3
237_1
82 years, male
786.5
384_1
83 years, male
754.3
347_1
72 years, male
754.0
375_1
74 years, female
738.6
389_1
86 years, female
736.7
319_1
81 years, male
725.6
425_1
59 years, female
704.6
163_1
78 years, male
703.9
321_1
62 years, female
676.4
447_1
81 years, male
673.4
352_1
62 years, male
661.3
6_1
73 years, female
630.0
350_1
84 years, female
627.0
355_1
70 years, female
624.9
322_1
76 years, male
622.5
386_1
76 years, male
619.6
246_1
77 years, male
619.4
243_1
75 years, male
616.0
35_1
74 years, female
601.6
307_1
66 years, female
600.9
394_1
75 years, female
597.8
2_1
77 years, female
593.6
526_1
61 years, male
556.0
354_1
81 years, female
551.2
172_1
72 years, female
548.5
379_1
60 years, male
544.8
173_1
67 years, male
543.6
316_1
62 years, male
541.5
293_1
68 years, female
537.9
480_1
63 years, male
535.8
377_1
82 years, female
535.7
406_1
79 years, male
532.8
468_1
89 years, male
522.4
42_1
85 years, male
519.6
503_1
68 years, male
517.3
217_1
76 years, male
515.9
318_1
68 years, male
509.1
126_1
63 years, male
506.6
251_1
78 years, male
504.5
351_1
91 years, male
500.1
405_1
91 years, male
498.8
189_1
76 years, male
492.3
348_1
84 years, male
475.6
254_1
77 years, female
474.1
404_1
82 years, female
464.1
349_1
83 years, male
458.3
153_1
70 years, female
456.5
517_1
88 years, male
456.0
229_1
69 years, female
455.7
4_1
88 years, female
449.8
115_1
83 years, male
443.2
99_1
64 years, male
442.5
177_1
74 years, male
441.5
317_1
60 years, male
440.7
291_1
76 years, male
440.3
356_1
87 years, female
440.0
9_1
66 years, female
437.7
137_1
83 years, male
433.0
117_1
61 years, male
432.8
292_1
71 years, male
430.6
265_1
87 years, male
426.1
266_1
85 years, male
425.4
518_1
75 years, female
424.4
320_1
89 years, female
423.8
335_1
73 years, female
417.8
41_1
94 years, female
413.2
376_1
75 years, female
403.6
311_1
78 years, male
403.2
145_1
84 years, male
396.2
396_1
62 years, male
393.4
495_1
57 years, female
384.6
286_1
68 years, female
382.9
162_1
79 years, female
380.8
452_1
88 years, female
377.2
18_1
88 years, male
375.6
313_1
79 years, female
375.3
139_1
64 years, female
369.4
17_1
71 years, male
366.9
414_1
84 years, female
361.0
353_1
82 years, female
358.5
120_1
70 years, female
355.4
119_1
70 years, female
352.3
295_1
61 years, female
344.2
264_1
73 years, female
342.3
490_1
67 years, female
340.8
89_1
63 years, male
333.3
314_1
67 years, male
319.0
109_1
81 years, female
316.2
43_1
64 years, female
316.0
324_1
76 years, male
314.5
81_1
67 years, male
313.7
315_1
62 years, female
307.7
499_1
55 years, female
302.8
415_1
77 years, female
301.3
142_1
61 years, female
301.1
506_1
65 years, male
281.5
466_1
57 years, female
278.3
32_1
67 years, male
277.5
288_1
66 years, female
239.1
149_1
88 years, male
224.7
491_1
89 years, female
219.8
413_1
59 years, female
203.3
308_1
70 years, female
194.7
501_1
88 years, male
155.0
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.