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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA029458
Pigment epithelial cells
Not detected
Photoreceptor cells
High
Limiting membrane
Not detected
Outer plexiform layer
Not detected
Inner nuclear layer
Not detected
Inner plexiform layer
Not detected
Ganglion cells
Not detected
Nerve fiber layer
Not detected
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 1154.2
Min nTPM: 262.2
Std nTPM: 167.5
Median nTPM:
352_1
62 years, male
1154.2
172_1
72 years, female
1030.7
237_1
82 years, male
982.1
375_1
74 years, female
967.8
386_1
76 years, male
953.6
355_1
70 years, female
941.8
347_1
72 years, male
927.6
389_1
86 years, female
904.8
6_1
73 years, female
888.0
218_1
71 years, female
883.7
447_1
81 years, male
882.1
316_1
62 years, male
862.5
246_1
77 years, male
825.4
229_1
69 years, female
816.3
379_1
60 years, male
806.9
425_1
59 years, female
795.6
354_1
81 years, female
792.8
189_1
76 years, male
790.3
321_1
62 years, female
782.8
350_1
84 years, female
778.3
286_1
68 years, female
759.6
526_1
61 years, male
758.8
243_1
75 years, male
754.9
163_1
78 years, male
754.0
324_1
76 years, male
753.7
217_1
76 years, male
749.2
319_1
81 years, male
741.6
292_1
71 years, male
740.9
335_1
73 years, female
740.9
35_1
74 years, female
731.3
126_1
63 years, male
728.2
405_1
91 years, male
725.0
9_1
66 years, female
724.4
251_1
78 years, male
724.3
480_1
63 years, male
713.5
177_1
74 years, male
711.0
115_1
83 years, male
698.4
468_1
89 years, male
688.7
394_1
75 years, female
686.5
99_1
64 years, male
682.0
404_1
82 years, female
676.4
153_1
70 years, female
673.8
265_1
87 years, male
668.0
490_1
67 years, female
660.1
466_1
57 years, female
654.2
348_1
84 years, male
653.8
81_1
67 years, male
653.4
376_1
75 years, female
650.6
322_1
76 years, male
644.8
503_1
68 years, male
644.5
415_1
77 years, female
642.4
349_1
83 years, male
641.1
291_1
76 years, male
639.8
318_1
68 years, male
639.4
43_1
64 years, female
634.9
117_1
61 years, male
634.8
307_1
66 years, female
634.1
377_1
82 years, female
633.7
356_1
87 years, female
630.0
406_1
79 years, male
627.2
32_1
67 years, male
621.1
384_1
83 years, male
614.0
396_1
62 years, male
608.1
320_1
89 years, female
601.3
518_1
75 years, female
600.0
517_1
88 years, male
595.2
353_1
82 years, female
593.9
266_1
85 years, male
570.3
293_1
68 years, female
569.1
162_1
79 years, female
568.3
499_1
55 years, female
564.8
414_1
84 years, female
563.3
173_1
67 years, male
561.2
145_1
84 years, male
559.9
137_1
83 years, male
556.1
142_1
61 years, female
553.7
18_1
88 years, male
549.7
311_1
78 years, male
533.7
2_1
77 years, female
529.0
42_1
85 years, male
526.9
254_1
77 years, female
526.6
264_1
73 years, female
507.6
313_1
79 years, female
506.7
317_1
60 years, male
500.0
120_1
70 years, female
487.4
495_1
57 years, female
477.2
315_1
62 years, female
476.0
17_1
71 years, male
465.7
351_1
91 years, male
464.0
139_1
64 years, female
455.7
288_1
66 years, female
437.2
491_1
89 years, female
436.4
413_1
59 years, female
434.6
119_1
70 years, female
431.2
149_1
88 years, male
430.7
506_1
65 years, male
417.3
89_1
63 years, male
395.1
41_1
94 years, female
374.1
109_1
81 years, female
370.1
314_1
67 years, male
360.6
452_1
88 years, female
358.2
308_1
70 years, female
357.2
295_1
61 years, female
353.4
4_1
88 years, female
349.7
501_1
88 years, male
262.2
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.