HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:28.3 nTPM
HPA:28.3 nTPM
GTEx:27.4 nTPM
FANTOM5:44.8 Scaled Tags Per Million
Pig:15.2 nTPM
Mouse:39.5 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007455
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 28.3
Sample id Sample description nTPM
Hippocampus
nTPM: 27.8
2621 Female, age 67, right hemisphere 29.0
1898 Male, age 80, left hemisphere 28.5
1855 Male, age 76, left hemisphere 27.4
1911 Female, age 85, right hemisphere 27.4
2529 Female, age 94, left hemisphere 27.3
2148 Female, age 91, left hemisphere 27.2
Dentate gyrus
nTPM: 27.1
2246 Female, age 85, both hemispheres 28.0
2010 Male, age 76, both hemispheres 27.3
1927 Female, age 91, both hemispheres 27.2
2530 Female, age 94, left hemisphere 26.9
2531 Female, age 67, both hemispheres 26.8
2528 Male, age 74, both hemispheres 26.1
Entorhinal gyrus
nTPM: 27.4
2686 Male, age 75, right hemisphere 28.6
2764 Male, age 80, right hemisphere 28.0
1787 Male, age 76, left hemisphere 27.4
2117 Female, age 91, right hemisphere 27.0
1938 Female, age 85, left hemisphere 26.8
2613 Female, age 94, left hemisphere 26.6
Hippocampus, CA1
nTPM: 27.7
2527 Male, age 74, both hemispheres 29.8
2749 Male, age 80, left hemisphere 27.7
1873 Female, age 85, both hemispheres 27.6
2045 Male, age 76, both hemispheres 27.5
2082 Female, age 91, right hemisphere 26.1
Hippocampus, CA2
nTPM: 27.0
1892 Male, age 76, both hemispheres 29.0
2249 Male, age 74, both hemispheres 28.4
2437 Female, age 94, left hemisphere 26.7
2113 Female, age 91, right hemisphere 26.4
1963 Male, age 80, left hemisphere 25.9
1940 Female, age 85, left hemisphere 25.6
Hippocampus, CA3
nTPM: 27.2
2620 Female, age 94, left hemisphere 28.5
1867 Male, age 76, both hemispheres 28.3
2436 Male, age 74, both hemispheres 28.3
2861 Female, age 67, both hemispheres 26.5
2137 Male, age 80, left hemisphere 26.2
1891 Female, age 85, both hemispheres 25.1
Parahippocampal cortex
nTPM: 27.7
2692 Male, age 74, both hemispheres 29.2
2245 Female, age 91, both hemispheres 28.8
2622 Female, age 67, right hemisphere 28.8
1850 Male, age 80, both hemispheres 28.7
1990 Female, age 91, right hemisphere 28.5
1933 Female, age 85, both hemispheres 27.6
2693 Female, age 94, both hemispheres 27.4
2250 Female, age 67, right hemisphere 27.1
2018 Male, age 76, both hemispheres 25.5
2532 Female, age 72, left hemisphere 25.3
Perirhinal gyrus
nTPM: 28.3
1794 Male, age 80, right hemisphere 29.7
2848 Male, age 76, right hemisphere 29.1
1841 Female, age 85, right hemisphere 28.6
1847 Female, age 91, left hemisphere 28.6
2521 Female, age 94, right hemisphere 25.6
Subiculum
nTPM: 27.3
2619 Male, age 74, both hemispheres 29.0
2438 Female, age 94, left hemisphere 28.9
1901 Male, age 80, both hemispheres 27.0
1977 Female, age 85, both hemispheres 26.8
2042 Male, age 76, both hemispheres 26.3
2729 Female, age 91, right hemisphere 25.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 27.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.4
Samples: 197

Max nTPM: 47.9
Min nTPM: 11.3
Std nTPM: 6.4
Median nTPM: 26.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 47.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 46.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 46.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 45.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 43.6
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 42.0
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 41.5
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 41.4
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 41.1
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 40.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 39.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 44.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 44.8
FF:10169-103B7 60 years, female 48.1
FF:10153-102I9 76 years, female 41.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 15.2
Samples: 4

Max nTPM: 19.8
Min nTPM: 11.4
Sample A Female 19.8
Sample B Female 14.1
Sample C Male 15.5
Sample D Male 11.4
Entorhinal cortex
nTPM: 12.6
Samples: 4

Max nTPM: 14.6
Min nTPM: 11.4
Sample A Female 12.8
Sample B Female 14.6
Sample C Male 11.6
Sample D Male 11.4
Subiculum
nTPM: 12.7
Samples: 4

Max nTPM: 17.0
Min nTPM: 10.8
Sample A Female 17.0
Sample B Female 10.8
Sample C Male 11.8
Sample D Male 11.3
Ventral hippocampus
nTPM: 13.9
Samples: 4

Max nTPM: 16.3
Min nTPM: 9.8
Sample A Female 13.8
Sample B Female 9.8
Sample C Male 16.3
Sample D Male 15.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 39.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 36.4
Samples: 4

Max nTPM: 39.3
Min nTPM: 33.9
Sample A Male 36.5
Sample B Male 39.3
Sample C Female 35.7
Sample D Female 33.9
Hippocampal formation
nTPM: 39.5
Samples: 4

Max nTPM: 41.8
Min nTPM: 34.9
Sample A Male 41.7
Sample B Male 39.5
Sample C Female 34.9
Sample D Female 41.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
68795410 Antisense, RP_041122_01_A10, Mouse strain C57BL/6J (56 days, male) 1.6

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