COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: High
Glandular cells: Low
Peripheral nerve/ganglion: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:82.6 nTPM
HPA:18.9 nTPM
GTEx:82.6 nTPM
FANTOM5:59.6 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA001819Antibody CAB005416
Endothelial cells MediumHigh
Glandular cells Not detectedMedium
Peripheral nerve/ganglion LowMedium




COLON - HPA RNA-seqi
Average nTPM 18.9
overview
Male, age 54 		Colon sample 67
nTPM: 16.5
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 12.5
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 12.5
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 17.1
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 12.8
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 50.1
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 11.6
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 11.1
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 28.1
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 13.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 17.1
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 20.9
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 22.4
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 82.6
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 82.6
Samples: 373

Max nTPM: 170.4
Min nTPM: 14.7
Std nTPM: 24.2
Median nTPM: 83.5
GTEX-13X6J-2826-SM-7EPGA 50-59 years, male 170.4
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 159.7
GTEX-1PBJJ-2026-SM-DTX8U 30-39 years, male 149.1
GTEX-YFCO-1526-SM-5YYB8 40-49 years, male 144.2
GTEX-1I1CD-2826-SM-A9SL4 60-69 years, female 143.7
GTEX-12WSM-1426-SM-5GCPA 60-69 years, male 142.9
GTEX-1LB8K-2526-SM-DIPEQ 50-59 years, male 142.3
GTEX-1N2EF-1726-SM-EXUSI 60-69 years, male 136.1
GTEX-15ER7-2826-SM-6PAN2 20-29 years, female 132.8
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 131.5
GTEX-1B996-2726-SM-7DUGG 60-69 years, male 130.6
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Colon - Transverse
Average nTPM: 43.8
Samples: 406

Max nTPM: 141.7
Min nTPM: 10.3
Std nTPM: 26.1
Median nTPM: 36.8
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 141.7
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 123.4
GTEX-11GSP-1626-SM-5986N 60-69 years, female 121.8
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 117.4
GTEX-1GMR2-1726-SM-9JGI2 50-59 years, male 115.7
GTEX-1C2JI-1626-SM-7EPHC 50-59 years, male 110.1
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 107.1
GTEX-1LVAN-2526-SM-CNPPC 50-59 years, female 105.4
GTEX-17F9E-1826-SM-7IGMC 50-59 years, male 103.2
GTEX-15DZA-0926-SM-69LQ3 30-39 years, female 102.4
GTEX-15CHC-1626-SM-5ZZWS 60-69 years, female 100.3
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 59.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 59.6
FF:10014-101C5 62,83,84 years, mixed 59.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.