HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:25.1 nTPM
HPA:25.1 nTPM
GTEx:26.7 nTPM
FANTOM5:43.2 Scaled Tags Per Million
Pig:41.1 nTPM
Mouse:18.0 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA031394
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 25.1
Sample id Sample description nTPM
Hippocampus
nTPM: 24.3
2621 Female, age 67, right hemisphere 26.8
2148 Female, age 91, left hemisphere 25.2
1898 Male, age 80, left hemisphere 24.6
1911 Female, age 85, right hemisphere 24.4
1855 Male, age 76, left hemisphere 23.1
2529 Female, age 94, left hemisphere 21.9
Dentate gyrus
nTPM: 24.6
2530 Female, age 94, left hemisphere 27.9
2531 Female, age 67, both hemispheres 25.2
2246 Female, age 85, both hemispheres 25.1
1927 Female, age 91, both hemispheres 23.7
2010 Male, age 76, both hemispheres 23.6
2528 Male, age 74, both hemispheres 22.2
Entorhinal gyrus
nTPM: 25.1
2764 Male, age 80, right hemisphere 27.2
2117 Female, age 91, right hemisphere 25.7
2613 Female, age 94, left hemisphere 25.2
2686 Male, age 75, right hemisphere 24.4
1787 Male, age 76, left hemisphere 24.3
1938 Female, age 85, left hemisphere 23.5
Hippocampus, CA1
nTPM: 23.3
1873 Female, age 85, both hemispheres 24.8
2749 Male, age 80, left hemisphere 24.5
2045 Male, age 76, both hemispheres 24.4
2082 Female, age 91, right hemisphere 23.3
2527 Male, age 74, both hemispheres 19.3
Hippocampus, CA2
nTPM: 23.9
1940 Female, age 85, left hemisphere 26.2
1963 Male, age 80, left hemisphere 25.4
2437 Female, age 94, left hemisphere 25.0
1892 Male, age 76, both hemispheres 23.6
2113 Female, age 91, right hemisphere 21.8
2249 Male, age 74, both hemispheres 21.5
Hippocampus, CA3
nTPM: 24.3
2620 Female, age 94, left hemisphere 27.6
2861 Female, age 67, both hemispheres 27.3
1891 Female, age 85, both hemispheres 26.0
2137 Male, age 80, left hemisphere 22.8
1867 Male, age 76, both hemispheres 22.4
2436 Male, age 74, both hemispheres 19.4
Parahippocampal cortex
nTPM: 23.9
2532 Female, age 72, left hemisphere 27.0
2693 Female, age 94, both hemispheres 26.1
2245 Female, age 91, both hemispheres 25.4
1990 Female, age 91, right hemisphere 24.8
1933 Female, age 85, both hemispheres 24.5
1850 Male, age 80, both hemispheres 24.3
2018 Male, age 76, both hemispheres 22.7
2692 Male, age 74, both hemispheres 22.4
2250 Female, age 67, right hemisphere 21.1
2622 Female, age 67, right hemisphere 20.4
Perirhinal gyrus
nTPM: 23.7
1847 Female, age 91, left hemisphere 24.3
2848 Male, age 76, right hemisphere 24.1
1794 Male, age 80, right hemisphere 24.0
2521 Female, age 94, right hemisphere 23.5
1841 Female, age 85, right hemisphere 22.4
Subiculum
nTPM: 23.9
1977 Female, age 85, both hemispheres 27.4
1901 Male, age 80, both hemispheres 24.3
2042 Male, age 76, both hemispheres 23.8
2729 Female, age 91, right hemisphere 23.4
2619 Male, age 74, both hemispheres 23.1
2438 Female, age 94, left hemisphere 21.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 26.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 26.7
Samples: 197

Max nTPM: 43.2
Min nTPM: 16.2
Std nTPM: 4.4
Median nTPM: 25.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 43.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 40.2
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 39.1
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 39.0
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 38.7
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 38.1
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 36.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 35.3
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 35.3
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 35.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 34.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 43.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 43.2
FF:10153-102I9 76 years, female 57.2
FF:10169-103B7 60 years, female 29.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 41.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 36.0
Samples: 4

Max nTPM: 46.6
Min nTPM: 25.9
Sample A Female 46.6
Sample B Female 40.0
Sample C Male 31.4
Sample D Male 25.9
Entorhinal cortex
nTPM: 41.1
Samples: 4

Max nTPM: 47.7
Min nTPM: 33.0
Sample A Female 42.1
Sample B Female 47.7
Sample C Male 41.7
Sample D Male 33.0
Subiculum
nTPM: 27.1
Samples: 4

Max nTPM: 37.9
Min nTPM: 21.0
Sample A Female 37.9
Sample B Female 24.6
Sample C Male 24.9
Sample D Male 21.0
Ventral hippocampus
nTPM: 30.5
Samples: 4

Max nTPM: 48.6
Min nTPM: 20.9
Sample A Female 24.5
Sample B Female 20.9
Sample C Male 27.8
Sample D Male 48.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 18.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.0
Samples: 4

Max nTPM: 20.3
Min nTPM: 15.2
Sample A Male 19.6
Sample B Male 20.3
Sample C Female 17.0
Sample D Female 15.2
Hippocampal formation
nTPM: 16.4
Samples: 4

Max nTPM: 20.3
Min nTPM: 13.8
Sample A Male 20.3
Sample B Male 16.3
Sample C Female 15.2
Sample D Female 13.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
76003520 Antisense, RP_060608_02_F01, Mouse strain C57BL/6J (56 days, male) 0.2

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