HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:357.5 nTPM
HPA:357.5 nTPM
GTEx:324.8 nTPM
FANTOM5:144.8 Scaled Tags Per Million
Pig:199.3 nTPM
Mouse:516.9 nTPM
Allen mouse:12.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 357.5
Sample id Sample description nTPM
Hippocampus
nTPM: 341.0
1898 Male, age 80, left hemisphere 374.3
2529 Female, age 94, left hemisphere 347.4
1855 Male, age 76, left hemisphere 338.2
1911 Female, age 85, right hemisphere 334.9
2621 Female, age 67, right hemisphere 330.2
2148 Female, age 91, left hemisphere 321.1
Dentate gyrus
nTPM: 340.1
1927 Female, age 91, both hemispheres 358.8
2010 Male, age 76, both hemispheres 355.1
2530 Female, age 94, left hemisphere 341.9
2246 Female, age 85, both hemispheres 335.6
2528 Male, age 74, both hemispheres 331.9
2531 Female, age 67, both hemispheres 317.1
Entorhinal gyrus
nTPM: 335.1
1938 Female, age 85, left hemisphere 351.5
1787 Male, age 76, left hemisphere 342.0
2764 Male, age 80, right hemisphere 341.2
2117 Female, age 91, right hemisphere 332.8
2613 Female, age 94, left hemisphere 325.0
2686 Male, age 75, right hemisphere 318.3
Hippocampus, CA1
nTPM: 348.9
2749 Male, age 80, left hemisphere 386.4
1873 Female, age 85, both hemispheres 348.0
2527 Male, age 74, both hemispheres 347.1
2045 Male, age 76, both hemispheres 333.9
2082 Female, age 91, right hemisphere 329.1
Hippocampus, CA2
nTPM: 352.5
1892 Male, age 76, both hemispheres 373.2
1963 Male, age 80, left hemisphere 369.8
2249 Male, age 74, both hemispheres 367.2
2437 Female, age 94, left hemisphere 347.6
1940 Female, age 85, left hemisphere 332.6
2113 Female, age 91, right hemisphere 324.8
Hippocampus, CA3
nTPM: 341.9
1867 Male, age 76, both hemispheres 362.2
2436 Male, age 74, both hemispheres 355.8
2137 Male, age 80, left hemisphere 350.7
1891 Female, age 85, both hemispheres 348.3
2620 Female, age 94, left hemisphere 317.2
2861 Female, age 67, both hemispheres 317.1
Parahippocampal cortex
nTPM: 338.0
1850 Male, age 80, both hemispheres 362.8
2250 Female, age 67, right hemisphere 355.6
1933 Female, age 85, both hemispheres 349.1
1990 Female, age 91, right hemisphere 347.1
2018 Male, age 76, both hemispheres 343.6
2693 Female, age 94, both hemispheres 335.8
2245 Female, age 91, both hemispheres 334.0
2692 Male, age 74, both hemispheres 319.8
2532 Female, age 72, left hemisphere 318.3
2622 Female, age 67, right hemisphere 314.3
Perirhinal gyrus
nTPM: 357.5
1847 Female, age 91, left hemisphere 375.7
1794 Male, age 80, right hemisphere 367.7
1841 Female, age 85, right hemisphere 362.5
2521 Female, age 94, right hemisphere 347.5
2848 Male, age 76, right hemisphere 333.9
Subiculum
nTPM: 337.5
1901 Male, age 80, both hemispheres 358.5
1977 Female, age 85, both hemispheres 345.3
2438 Female, age 94, left hemisphere 332.7
2619 Male, age 74, both hemispheres 332.6
2042 Male, age 76, both hemispheres 329.3
2729 Female, age 91, right hemisphere 326.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 324.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 324.8
Samples: 197

Max nTPM: 879.1
Min nTPM: 145.8
Std nTPM: 115.6
Median nTPM: 309.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 879.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 731.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 725.1
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 663.3
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 654.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 615.9
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 580.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 576.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 572.4
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 553.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 547.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 144.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 144.8
FF:10169-103B7 60 years, female 178.9
FF:10153-102I9 76 years, female 110.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 199.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 197.9
Samples: 4

Max nTPM: 253.2
Min nTPM: 147.7
Sample A Female 253.2
Sample B Female 172.6
Sample C Male 217.9
Sample D Male 147.7
Entorhinal cortex
nTPM: 199.4
Samples: 4

Max nTPM: 302.2
Min nTPM: 141.6
Sample A Female 151.8
Sample B Female 302.2
Sample C Male 201.9
Sample D Male 141.6
Subiculum
nTPM: 147.8
Samples: 4

Max nTPM: 200.3
Min nTPM: 113.8
Sample A Female 200.3
Sample B Female 126.1
Sample C Male 113.8
Sample D Male 151.0
Ventral hippocampus
nTPM: 154.7
Samples: 4

Max nTPM: 171.7
Min nTPM: 134.1
Sample A Female 164.7
Sample B Female 134.1
Sample C Male 148.2
Sample D Male 171.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 516.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 513.2
Samples: 4

Max nTPM: 559.6
Min nTPM: 476.1
Sample A Male 476.1
Sample B Male 523.5
Sample C Female 559.6
Sample D Female 493.7
Hippocampal formation
nTPM: 516.9
Samples: 4

Max nTPM: 599.5
Min nTPM: 473.0
Sample A Male 599.5
Sample B Male 473.3
Sample C Female 521.8
Sample D Female 473.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.8
68301443 Antisense, RP_041130_01_C06, Mouse strain C57BL/6J (56 days, male) 12.8

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