HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:10.9 nTPM
HPA:10.9 nTPM
GTEx:80.9 nTPM
FANTOM5:199.4 Scaled Tags Per Million
Pig:84.6 nTPM
Mouse:148.7 nTPM
Allen mouse:9.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000898Antibody CAB005219
Glial cells MediumHigh
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 10.9
Sample id Sample description nTPM
Hippocampus
nTPM: 8.5
1898 Male, age 80, left hemisphere 13.1
2529 Female, age 94, left hemisphere 11.9
1855 Male, age 76, left hemisphere 8.1
2621 Female, age 67, right hemisphere 7.2
2148 Female, age 91, left hemisphere 5.9
1911 Female, age 85, right hemisphere 4.8
Dentate gyrus
nTPM: 5.6
2010 Male, age 76, both hemispheres 9.5
2528 Male, age 74, both hemispheres 8.2
2246 Female, age 85, both hemispheres 6.6
1927 Female, age 91, both hemispheres 5.8
2530 Female, age 94, left hemisphere 3.2
2531 Female, age 67, both hemispheres 0.0
Entorhinal gyrus
nTPM: 5.9
2764 Male, age 80, right hemisphere 9.8
2117 Female, age 91, right hemisphere 9.5
1938 Female, age 85, left hemisphere 8.5
1787 Male, age 76, left hemisphere 7.7
2613 Female, age 94, left hemisphere 0.0
2686 Male, age 75, right hemisphere 0.0
Hippocampus, CA1
nTPM: 10.9
2749 Male, age 80, left hemisphere 19.3
2527 Male, age 74, both hemispheres 15.7
1873 Female, age 85, both hemispheres 11.7
2082 Female, age 91, right hemisphere 5.7
2045 Male, age 76, both hemispheres 2.0
Hippocampus, CA2
nTPM: 9.2
2249 Male, age 74, both hemispheres 22.1
1892 Male, age 76, both hemispheres 11.5
1963 Male, age 80, left hemisphere 11.3
2113 Female, age 91, right hemisphere 4.6
1940 Female, age 85, left hemisphere 3.2
2437 Female, age 94, left hemisphere 2.3
Hippocampus, CA3
nTPM: 7.9
2436 Male, age 74, both hemispheres 20.4
2137 Male, age 80, left hemisphere 9.8
1867 Male, age 76, both hemispheres 9.0
1891 Female, age 85, both hemispheres 6.7
2620 Female, age 94, left hemisphere 1.6
2861 Female, age 67, both hemispheres 0.0
Parahippocampal cortex
nTPM: 6.3
1850 Male, age 80, both hemispheres 12.6
2250 Female, age 67, right hemisphere 10.9
1933 Female, age 85, both hemispheres 9.6
1990 Female, age 91, right hemisphere 9.4
2245 Female, age 91, both hemispheres 7.8
2532 Female, age 72, left hemisphere 5.0
2018 Male, age 76, both hemispheres 4.4
2622 Female, age 67, right hemisphere 3.6
2693 Female, age 94, both hemispheres 0.3
2692 Male, age 74, both hemispheres 0.0
Perirhinal gyrus
nTPM: 9.7
1847 Female, age 91, left hemisphere 15.6
1794 Male, age 80, right hemisphere 11.3
1841 Female, age 85, right hemisphere 11.3
2521 Female, age 94, right hemisphere 5.8
2848 Male, age 76, right hemisphere 4.8
Subiculum
nTPM: 7.8
2619 Male, age 74, both hemispheres 10.6
2438 Female, age 94, left hemisphere 10.3
1977 Female, age 85, both hemispheres 9.0
1901 Male, age 80, both hemispheres 8.2
2729 Female, age 91, right hemisphere 4.7
2042 Male, age 76, both hemispheres 3.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 80.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 80.9
Samples: 197

Max nTPM: 132.0
Min nTPM: 48.6
Std nTPM: 14.3
Median nTPM: 79.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 132.0
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 127.8
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 120.4
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 119.2
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 112.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 112.1
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 111.5
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 108.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 107.8
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 107.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 104.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 199.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 199.4
FF:10169-103B7 60 years, female 240.6
FF:10153-102I9 76 years, female 158.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 84.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 84.7
Samples: 4

Max nTPM: 101.6
Min nTPM: 66.7
Sample A Female 101.6
Sample B Female 78.4
Sample C Male 91.9
Sample D Male 66.7
Entorhinal cortex
nTPM: 74.9
Samples: 4

Max nTPM: 86.7
Min nTPM: 65.6
Sample A Female 76.2
Sample B Female 86.7
Sample C Male 70.9
Sample D Male 65.6
Subiculum
nTPM: 78.4
Samples: 4

Max nTPM: 95.1
Min nTPM: 71.2
Sample A Female 95.1
Sample B Female 74.9
Sample C Male 71.2
Sample D Male 72.2
Ventral hippocampus
nTPM: 77.8
Samples: 4

Max nTPM: 84.4
Min nTPM: 61.2
Sample A Female 84.4
Sample B Female 61.2
Sample C Male 83.1
Sample D Male 82.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 148.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 141.4
Samples: 4

Max nTPM: 143.6
Min nTPM: 135.6
Sample A Male 142.8
Sample B Male 135.6
Sample C Female 143.4
Sample D Female 143.6
Hippocampal formation
nTPM: 148.7
Samples: 4

Max nTPM: 155.7
Min nTPM: 140.7
Sample A Male 143.0
Sample B Male 155.4
Sample C Female 155.7
Sample D Female 140.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.2
69735144 Antisense, RP_050503_02_B09, Mouse strain C57BL/6J (56 days, male) 9.2

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