COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:19.7 nTPM
HPA:19.7 nTPM
GTEx:12.8 nTPM
FANTOM5:17.7 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - Antibody stainingi
Antibody HPA053243
Endothelial cells Not detected
Glandular cells Low
Peripheral nerve/ganglion Not detected


COLON - HPA RNA-seqi
Average nTPM 19.7
overview
Male, age 54 		Colon sample 67
nTPM: 13.6
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 3.8
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 4.6
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 41.8
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 11.1
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 59.5
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 13.7
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 5.3
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 11.5
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 14
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 19.9
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 11.6
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 45.1
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 12.8
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 12.8
Samples: 373

Max nTPM: 105.3
Min nTPM: 1.5
Std nTPM: 11.2
Median nTPM: 9.2
GTEX-15ER7-2826-SM-6PAN2 20-29 years, female 105.3
GTEX-ZE9C-2126-SM-4WKGY 60-69 years, male 85.2
GTEX-1RLM8-1726-SM-E9TKF 50-59 years, male 61.9
GTEX-1I1CD-2826-SM-A9SL4 60-69 years, female 54.6
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 52.6
GTEX-1J8EW-2426-SM-CE6T5 60-69 years, female 50.2
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 47.8
GTEX-11ZU8-1126-SM-5EQ5K 60-69 years, male 46.8
GTEX-1R9PO-2026-SM-E9J4N 60-69 years, female 46.3
GTEX-WHSE-2726-SM-EZ6ML 20-29 years, male 46.3
GTEX-1HBPM-2626-SM-9WYU5 60-69 years, female 44.3
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Colon - Transverse
Average nTPM: 11.2
Samples: 406

Max nTPM: 236.4
Min nTPM: 1.6
Std nTPM: 17.3
Median nTPM: 7.0
GTEX-1IOXB-2626-SM-CJI2N 50-59 years, male 236.4
GTEX-14PK6-1726-SM-6871J 70-79 years, female 138.8
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 124.2
GTEX-Y3I4-1426-SM-4TT9C 50-59 years, male 91.7
GTEX-14JIY-3326-SM-6871E 60-69 years, male 72.2
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 62.0
GTEX-1LG7Y-2126-SM-DIPER 50-59 years, male 59.7
GTEX-17EVQ-1826-SM-7IGPH 70-79 years, male 54.2
GTEX-1AMEY-1926-SM-73KVT 30-39 years, female 44.3
GTEX-1JN1M-2626-SM-CY8I3 60-69 years, female 43.7
GTEX-1AX8Z-2726-SM-73KUC 60-69 years, male 43.5
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 17.7
FF:10014-101C5 62,83,84 years, mixed 17.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.