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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:995.9 nTPM
HPA:995.9 nTPM
GTEx:931.2 nTPM
FANTOM5:3235.0 Scaled Tags Per Million
Pig:1204.9 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 995.9
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 995.9
2048 Male, age 55, midline 1136.6
1981 Female, age 72, midline 1111.7
2816 Male, age 47, midline 1082.1
2565 Male, age 75, midline 857.8
2194 Female, age 79, both hemispheres 791.3
Cervical spinal cord, dorsal horn
nTPM: 943.4
2296 Male, age 66, both hemispheres 1275.4
2173 Female, age 72, unknown 1105.1
2721 Male, age 90, both hemispheres 1014.8
1877 Male, age 55, unknown 870.8
2069 Male, age 47, both hemispheres 765.8
2297 Male, age 75, both hemispheres 628.6
Cervical spinal cord, ventral horn
nTPM: 849.6
2098 Female, age 72, unknown 1116.0
2809 Male, age 90, both hemispheres 980.9
2068 Male, age 55, unknown 846.2
2295 Male, age 66, both hemispheres 732.6
2820 Female, age 79, both hemispheres 717.2
2480 Male, age 75, both hemispheres 704.4

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 931.2
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 931.2
Samples: 159

Max nTPM: 2069.5
Min nTPM: 304.3
Std nTPM: 353.4
Median nTPM: 913.1
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 2069.5
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 2046.0
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 1936.7
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 1855.6
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 1828.2
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 1637.9
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 1623.4
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 1609.4
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 1567.6
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 1513.0
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 1511.7
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 1494.9
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 1428.9
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 1418.0
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 1417.5
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 1413.8
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 1406.7
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 1363.9
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 1337.8
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 1320.8
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 1320.4
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 1319.7
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 1313.2
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 1289.7
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 1272.9
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 1268.2
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 1259.0
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 1250.0
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 1221.7
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 1219.6
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 1216.4
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 1216.4
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 1211.4
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 1184.0
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 1181.6
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 1171.7
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 1170.5
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 1161.8
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 1161.2
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 1137.9
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 1130.6
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 1128.6
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 1126.2
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 1108.3
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 1104.9
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 1094.3
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 1083.6
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 1079.9
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 1068.8
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 1058.8
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 1040.1
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 1029.6
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 1025.9
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 1025.6
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 1024.0
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 1021.7
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 1015.7
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 1002.6
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 1001.1
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 995.9
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 979.1
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 973.5
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 969.8
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 961.1
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 955.9
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 949.9
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 948.9
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 948.4
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 940.2
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 936.2
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 934.7
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 929.0
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 924.7
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 924.0
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 920.7
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 920.5
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 920.0
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 919.8
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 915.9
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 913.1
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 896.7
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 895.5
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 890.5
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 886.2
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 879.4
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 878.6
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 870.1
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 869.4
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 865.4
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 861.2
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 843.3
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 841.1
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 835.1
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 829.8
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 821.7
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 807.2
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 806.2
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 797.3
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 791.0
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 773.5
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 764.7
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 759.2
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 743.4
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 740.9
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 725.9
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 725.5
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 723.1
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 721.6
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 719.6
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 716.0
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 714.7
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 706.1
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 703.7
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 703.2
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 703.1
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 700.4
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 697.0
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 675.0
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 673.0
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 672.1
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 669.3
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 668.2
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 660.2
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 652.2
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 644.7
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 634.1
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 633.2
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 631.4
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 630.4
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 627.1
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 624.2
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 616.0
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 605.2
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 596.6
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 590.1
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 584.4
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 577.6
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 566.9
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 546.8
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 539.4
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 536.7
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 535.4
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 529.9
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 523.4
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 512.6
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 465.7
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 445.6
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 441.2
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 440.1
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 425.9
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 416.3
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 413.1
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 405.7
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 388.9
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 386.4
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 377.8
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 354.6
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 328.3
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 304.3
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 3235.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 3235.0
FF:10159-103A6 76 years, female 4149.1
FF:10181-103D1 60 years, female 2321.0

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1204.9
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 1204.9
Samples: 4

Max nTPM: 1740.2
Min nTPM: 680.9
Sample A Female 680.9
Sample B Female 1254.9
Sample C Male 1740.2
Sample D Male 1143.7
Ventral spinal cord
nTPM: 996.3
Samples: 4

Max nTPM: 1193.5
Min nTPM: 828.2
Sample A Female 828.2
Sample B Female 935.1
Sample C Male 1193.5
Sample D Male 1028.3

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